Protein–RNA interactions for Protein: Q92546

RGP1, RAB6A-GEF complex partner protein 2, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1Q92546 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RGP1Q92546 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.51■□□□□ 0.55
RGP1Q92546 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RGP1Q92546 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RGP1Q92546 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RGP1Q92546 AC092667.1-201ENST00000434301 2586 ntBASIC18.51■□□□□ 0.55
RGP1Q92546 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.51■□□□□ 0.55
RGP1Q92546 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RGP1Q92546 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RGP1Q92546 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RGP1Q92546 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RGP1Q92546 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RGP1Q92546 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RGP1Q92546 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.5■□□□□ 0.55
RGP1Q92546 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RGP1Q92546 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RGP1Q92546 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.5■□□□□ 0.55
RGP1Q92546 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RGP1Q92546 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.5■□□□□ 0.55
RGP1Q92546 AP004607.7-201ENST00000527152 1677 ntBASIC18.5■□□□□ 0.55
RGP1Q92546 PKD1P6-201ENST00000343738 4769 ntBASIC18.5■□□□□ 0.55
RGP1Q92546 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RGP1Q92546 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RGP1Q92546 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RGP1Q92546 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RGP1Q92546 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RGP1Q92546 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RGP1Q92546 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RGP1Q92546 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RGP1Q92546 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RGP1Q92546 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RGP1Q92546 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.49■□□□□ 0.55
RGP1Q92546 AL034346.1-201ENST00000568244 1277 ntBASIC18.49■□□□□ 0.55
RGP1Q92546 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RGP1Q92546 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RGP1Q92546 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RGP1Q92546 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.49■□□□□ 0.55
RGP1Q92546 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RGP1Q92546 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RGP1Q92546 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RGP1Q92546 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RGP1Q92546 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RGP1Q92546 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RGP1Q92546 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.48■□□□□ 0.55
RGP1Q92546 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.48■□□□□ 0.55
RGP1Q92546 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RGP1Q92546 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RGP1Q92546 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RGP1Q92546 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RGP1Q92546 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RGP1Q92546 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RGP1Q92546 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RGP1Q92546 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RGP1Q92546 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RGP1Q92546 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.48■□□□□ 0.55
RGP1Q92546 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.47■□□□□ 0.55
RGP1Q92546 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RGP1Q92546 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RGP1Q92546 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.47■□□□□ 0.55
RGP1Q92546 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
RGP1Q92546 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RGP1Q92546 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RGP1Q92546 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.47■□□□□ 0.55
RGP1Q92546 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RGP1Q92546 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.47■□□□□ 0.55
RGP1Q92546 MIR3621-201ENST00000580529 85 ntBASIC18.47■□□□□ 0.55
RGP1Q92546 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.47■□□□□ 0.55
RGP1Q92546 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.47■□□□□ 0.55
RGP1Q92546 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.47■□□□□ 0.55
RGP1Q92546 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.47■□□□□ 0.55
RGP1Q92546 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.47■□□□□ 0.55
RGP1Q92546 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RGP1Q92546 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.47■□□□□ 0.55
RGP1Q92546 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.46■□□□□ 0.55
RGP1Q92546 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RGP1Q92546 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RGP1Q92546 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RGP1Q92546 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RGP1Q92546 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.46■□□□□ 0.55
RGP1Q92546 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RGP1Q92546 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.46■□□□□ 0.55
RGP1Q92546 AL356740.2-201ENST00000601559 647 ntBASIC18.46■□□□□ 0.55
RGP1Q92546 AL512631.2-201ENST00000604634 923 ntBASIC18.46■□□□□ 0.55
RGP1Q92546 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RGP1Q92546 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
RGP1Q92546 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RGP1Q92546 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RGP1Q92546 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RGP1Q92546 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RGP1Q92546 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RGP1Q92546 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.45■□□□□ 0.54
RGP1Q92546 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RGP1Q92546 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.45■□□□□ 0.54
RGP1Q92546 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
RGP1Q92546 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RGP1Q92546 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.45■□□□□ 0.54
RGP1Q92546 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.45■□□□□ 0.54
RGP1Q92546 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RGP1Q92546 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RGP1Q92546 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms