Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 AC244015.2-201ENST00000616358 1861 ntBASIC19.31■□□□□ 0.68
RNF138Q8WVD3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 KRT18P20-201ENST00000548986 1279 ntBASIC19.31■□□□□ 0.68
RNF138Q8WVD3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 AC006015.1-201ENST00000429970 570 ntBASIC19.3■□□□□ 0.68
RNF138Q8WVD3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 AC022517.1-201ENST00000592429 346 ntBASIC19.3■□□□□ 0.68
RNF138Q8WVD3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF138Q8WVD3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF138Q8WVD3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 POU5F1P4-201ENST00000413175 1085 ntBASIC19.28■□□□□ 0.68
RNF138Q8WVD3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 AC092437.1-201ENST00000624794 1048 ntBASIC19.28■□□□□ 0.68
RNF138Q8WVD3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF138Q8WVD3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 SLC7A5P1-201ENST00000568957 537 ntBASIC19.27■□□□□ 0.68
RNF138Q8WVD3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RNF138Q8WVD3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms