Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC124016.1-201ENST00000609552 612 ntBASIC19.52■□□□□ 0.72
CHD6Q8TD26 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD6Q8TD26 AC026471.5-201ENST00000615068 467 ntBASIC19.52■□□□□ 0.72
CHD6Q8TD26 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD6Q8TD26 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHD6Q8TD26 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHD6Q8TD26 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHD6Q8TD26 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.52■□□□□ 0.71
CHD6Q8TD26 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.52■□□□□ 0.71
CHD6Q8TD26 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD6Q8TD26 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD6Q8TD26 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHD6Q8TD26 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD6Q8TD26 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD6Q8TD26 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD6Q8TD26 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHD6Q8TD26 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD6Q8TD26 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD6Q8TD26 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD6Q8TD26 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD6Q8TD26 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
CHD6Q8TD26 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.51■□□□□ 0.71
CHD6Q8TD26 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD6Q8TD26 AC068587.7-201ENST00000641602 218 ntBASIC19.51■□□□□ 0.71
CHD6Q8TD26 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD6Q8TD26 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD6Q8TD26 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.51■□□□□ 0.71
CHD6Q8TD26 DUSP8P5-201ENST00000422884 1815 ntBASIC19.51■□□□□ 0.71
CHD6Q8TD26 KRT8P9-201ENST00000558927 1449 ntBASIC19.5■□□□□ 0.71
CHD6Q8TD26 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHD6Q8TD26 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.5■□□□□ 0.71
CHD6Q8TD26 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD6Q8TD26 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHD6Q8TD26 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD6Q8TD26 AP000347.1-202ENST00000435868 847 ntBASIC19.5■□□□□ 0.71
CHD6Q8TD26 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CHD6Q8TD26 KRT17P1-201ENST00000399211 1546 ntBASIC19.5■□□□□ 0.71
CHD6Q8TD26 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD6Q8TD26 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD6Q8TD26 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.49■□□□□ 0.71
CHD6Q8TD26 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD6Q8TD26 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD6Q8TD26 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.49■□□□□ 0.71
CHD6Q8TD26 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.49■□□□□ 0.71
CHD6Q8TD26 AC113410.3-201ENST00000623366 203 ntBASIC19.49■□□□□ 0.71
CHD6Q8TD26 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CHD6Q8TD26 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.49■□□□□ 0.71
CHD6Q8TD26 AC139426.1-201ENST00000568218 2529 ntBASIC19.49■□□□□ 0.71
CHD6Q8TD26 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD6Q8TD26 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.49■□□□□ 0.71
CHD6Q8TD26 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.49■□□□□ 0.71
CHD6Q8TD26 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.49■□□□□ 0.71
CHD6Q8TD26 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.49■□□□□ 0.71
CHD6Q8TD26 OXCT2P1-201ENST00000447263 1535 ntBASIC19.49■□□□□ 0.71
CHD6Q8TD26 AC239809.2-201ENST00000415381 517 ntBASIC19.48■□□□□ 0.71
CHD6Q8TD26 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD6Q8TD26 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.48■□□□□ 0.71
CHD6Q8TD26 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.48■□□□□ 0.71
CHD6Q8TD26 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD6Q8TD26 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CHD6Q8TD26 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.48■□□□□ 0.71
CHD6Q8TD26 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHD6Q8TD26 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD6Q8TD26 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.48■□□□□ 0.71
CHD6Q8TD26 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHD6Q8TD26 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.48■□□□□ 0.71
CHD6Q8TD26 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD6Q8TD26 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CHD6Q8TD26 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.48■□□□□ 0.71
CHD6Q8TD26 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD6Q8TD26 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.48■□□□□ 0.71
CHD6Q8TD26 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD6Q8TD26 AL161729.1-201ENST00000604104 1402 ntBASIC19.48■□□□□ 0.71
CHD6Q8TD26 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHD6Q8TD26 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHD6Q8TD26 LSM12P1-201ENST00000411836 588 ntBASIC19.47■□□□□ 0.71
CHD6Q8TD26 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.47■□□□□ 0.71
CHD6Q8TD26 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.47■□□□□ 0.71
CHD6Q8TD26 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHD6Q8TD26 MMP23A-201ENST00000234610 1017 ntBASIC19.47■□□□□ 0.71
CHD6Q8TD26 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHD6Q8TD26 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHD6Q8TD26 AC010141.3-201ENST00000456659 717 ntBASIC19.47■□□□□ 0.71
CHD6Q8TD26 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.47■□□□□ 0.71
CHD6Q8TD26 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CHD6Q8TD26 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.46■□□□□ 0.71
CHD6Q8TD26 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.46■□□□□ 0.71
CHD6Q8TD26 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CHD6Q8TD26 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD6Q8TD26 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD6Q8TD26 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
CHD6Q8TD26 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHD6Q8TD26 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD6Q8TD26 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.46■□□□□ 0.71
CHD6Q8TD26 AC004687.1-201ENST00000579003 1625 ntBASIC19.46■□□□□ 0.71
CHD6Q8TD26 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHD6Q8TD26 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHD6Q8TD26 AL031963.3-201ENST00000606441 850 ntBASIC19.45■□□□□ 0.7
CHD6Q8TD26 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.45■□□□□ 0.7
CHD6Q8TD26 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms