Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 OXCT2P1-201ENST00000447263 1535 ntBASIC19.05■□□□□ 0.64
BBS1Q8NFJ9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BBS1Q8NFJ9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
BBS1Q8NFJ9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.05■□□□□ 0.64
BBS1Q8NFJ9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BBS1Q8NFJ9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BBS1Q8NFJ9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BBS1Q8NFJ9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
BBS1Q8NFJ9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BBS1Q8NFJ9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 AL049796.1-201ENST00000565336 1766 ntBASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 MIR3621-201ENST00000580529 85 ntBASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
BBS1Q8NFJ9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.03■□□□□ 0.64
BBS1Q8NFJ9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BBS1Q8NFJ9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BBS1Q8NFJ9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
BBS1Q8NFJ9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BBS1Q8NFJ9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
BBS1Q8NFJ9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BBS1Q8NFJ9 AP004607.7-201ENST00000527152 1677 ntBASIC19.02■□□□□ 0.64
BBS1Q8NFJ9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.02■□□□□ 0.64
BBS1Q8NFJ9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
BBS1Q8NFJ9 SRD5A1P1-201ENST00000442297 786 ntBASIC19.02■□□□□ 0.64
BBS1Q8NFJ9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.02■□□□□ 0.64
BBS1Q8NFJ9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
BBS1Q8NFJ9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BBS1Q8NFJ9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
BBS1Q8NFJ9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.02■□□□□ 0.63
BBS1Q8NFJ9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
BBS1Q8NFJ9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
BBS1Q8NFJ9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
BBS1Q8NFJ9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
BBS1Q8NFJ9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 AL512631.2-201ENST00000604634 923 ntBASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 AL035685.1-201ENST00000636663 812 ntBASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS1Q8NFJ9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19■□□□□ 0.63
BBS1Q8NFJ9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
BBS1Q8NFJ9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BBS1Q8NFJ9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BBS1Q8NFJ9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19■□□□□ 0.63
BBS1Q8NFJ9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BBS1Q8NFJ9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19■□□□□ 0.63
BBS1Q8NFJ9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BBS1Q8NFJ9 PTCHD3P2-201ENST00000424937 1205 ntBASIC19■□□□□ 0.63
BBS1Q8NFJ9 GRAMD4P7-201ENST00000578182 1232 ntBASIC19■□□□□ 0.63
BBS1Q8NFJ9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
BBS1Q8NFJ9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
BBS1Q8NFJ9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
BBS1Q8NFJ9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BBS1Q8NFJ9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19■□□□□ 0.63
BBS1Q8NFJ9 FEM1AP1-201ENST00000431297 1995 ntBASIC19■□□□□ 0.63
BBS1Q8NFJ9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BBS1Q8NFJ9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BBS1Q8NFJ9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms