Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.54■□□□□ 0.56
CPEB3Q8NE35 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 MIR935-201ENST00000401179 91 ntBASIC18.53■□□□□ 0.56
CPEB3Q8NE35 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 AC123595.1-201ENST00000440769 1046 ntBASIC18.53■□□□□ 0.56
CPEB3Q8NE35 YBX1P1-201ENST00000445822 960 ntBASIC18.53■□□□□ 0.56
CPEB3Q8NE35 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 LINC02228-203ENST00000641970 1355 ntBASIC18.53■□□□□ 0.56
CPEB3Q8NE35 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CPEB3Q8NE35 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPEB3Q8NE35 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.52■□□□□ 0.55
CPEB3Q8NE35 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
CPEB3Q8NE35 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CPEB3Q8NE35 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPEB3Q8NE35 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPEB3Q8NE35 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPEB3Q8NE35 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPEB3Q8NE35 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPEB3Q8NE35 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPEB3Q8NE35 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.51■□□□□ 0.55
CPEB3Q8NE35 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPEB3Q8NE35 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.51■□□□□ 0.55
CPEB3Q8NE35 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.51■□□□□ 0.55
CPEB3Q8NE35 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.51■□□□□ 0.55
CPEB3Q8NE35 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 AC244015.2-201ENST00000616358 1861 ntBASIC18.5■□□□□ 0.55
CPEB3Q8NE35 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 AC104564.3-201ENST00000582367 638 ntBASIC18.5■□□□□ 0.55
CPEB3Q8NE35 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.5■□□□□ 0.55
CPEB3Q8NE35 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms