Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AP006587.3-201ENST00000525742 1516 ntBASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 AL354811.1-201ENST00000610286 706 ntBASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIMC1Q8NDZ2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIMC1Q8NDZ2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
SIMC1Q8NDZ2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIMC1Q8NDZ2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIMC1Q8NDZ2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SIMC1Q8NDZ2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SIMC1Q8NDZ2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.93■□□□□ 0.78
SIMC1Q8NDZ2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.93■□□□□ 0.78
SIMC1Q8NDZ2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.93■□□□□ 0.78
SIMC1Q8NDZ2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.93■□□□□ 0.78
SIMC1Q8NDZ2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.93■□□□□ 0.78
SIMC1Q8NDZ2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIMC1Q8NDZ2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIMC1Q8NDZ2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
SIMC1Q8NDZ2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.92■□□□□ 0.78
SIMC1Q8NDZ2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.92■□□□□ 0.78
SIMC1Q8NDZ2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIMC1Q8NDZ2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIMC1Q8NDZ2 RARRES2P6-201ENST00000567333 442 ntBASIC19.92■□□□□ 0.78
SIMC1Q8NDZ2 TPRG1LP1-201ENST00000598702 760 ntBASIC19.92■□□□□ 0.78
SIMC1Q8NDZ2 AL358852.1-201ENST00000623174 1268 ntBASIC19.92■□□□□ 0.78
SIMC1Q8NDZ2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIMC1Q8NDZ2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.92■□□□□ 0.78
SIMC1Q8NDZ2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.92■□□□□ 0.78
SIMC1Q8NDZ2 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.92■□□□□ 0.78
SIMC1Q8NDZ2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 AC005224.4-201ENST00000583262 1652 ntBASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 AL034346.1-201ENST00000568244 1277 ntBASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 AC092667.1-201ENST00000434301 2586 ntBASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 AC055733.4-201ENST00000638462 1354 ntBASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIMC1Q8NDZ2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIMC1Q8NDZ2 AL137060.1-201ENST00000618151 2648 ntBASIC19.89■□□□□ 0.78
SIMC1Q8NDZ2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SIMC1Q8NDZ2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
SIMC1Q8NDZ2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.89■□□□□ 0.77
SIMC1Q8NDZ2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms