Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 MIR4497-201ENST00000583208 89 ntBASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMRP1Q8NCR6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
SMRP1Q8NCR6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.14■■□□□ 1.13
SMRP1Q8NCR6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.14■■□□□ 1.13
SMRP1Q8NCR6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SMRP1Q8NCR6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMRP1Q8NCR6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 ECEL1P3-201ENST00000427961 737 ntBASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMRP1Q8NCR6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.12■■□□□ 1.13
SMRP1Q8NCR6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMRP1Q8NCR6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.12■■□□□ 1.13
SMRP1Q8NCR6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.12■■□□□ 1.13
SMRP1Q8NCR6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMRP1Q8NCR6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.12■■□□□ 1.13
SMRP1Q8NCR6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMRP1Q8NCR6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.12■■□□□ 1.13
SMRP1Q8NCR6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.12■■□□□ 1.13
SMRP1Q8NCR6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.12■■□□□ 1.13
SMRP1Q8NCR6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.12■■□□□ 1.13
SMRP1Q8NCR6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
SMRP1Q8NCR6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.11■■□□□ 1.13
SMRP1Q8NCR6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMRP1Q8NCR6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMRP1Q8NCR6 MIR1224-201ENST00000408193 85 ntBASIC22.11■■□□□ 1.13
SMRP1Q8NCR6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.11■■□□□ 1.13
SMRP1Q8NCR6 FAM210CP-201ENST00000445714 574 ntBASIC22.11■■□□□ 1.13
SMRP1Q8NCR6 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.11■■□□□ 1.13
SMRP1Q8NCR6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMRP1Q8NCR6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMRP1Q8NCR6 AC060766.5-201ENST00000590539 871 ntBASIC22.11■■□□□ 1.13
SMRP1Q8NCR6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMRP1Q8NCR6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMRP1Q8NCR6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMRP1Q8NCR6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.1■■□□□ 1.13
SMRP1Q8NCR6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMRP1Q8NCR6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMRP1Q8NCR6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
SMRP1Q8NCR6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMRP1Q8NCR6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMRP1Q8NCR6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMRP1Q8NCR6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMRP1Q8NCR6 RPPH1-201ENST00000516869 333 ntBASIC22.1■■□□□ 1.13
SMRP1Q8NCR6 HLA-B-256ENST00000639848 1089 ntBASIC22.1■■□□□ 1.13
SMRP1Q8NCR6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMRP1Q8NCR6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMRP1Q8NCR6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 FAM197Y4-202ENST00000622692 608 ntBASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 KRT17P1-201ENST00000399211 1546 ntBASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMRP1Q8NCR6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms