Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM2Q8N967 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM2Q8N967 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.32■□□□□ 0.36
LRTM2Q8N967 BX664725.1-201ENST00000438252 379 ntBASIC17.32■□□□□ 0.36
LRTM2Q8N967 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.32■□□□□ 0.36
LRTM2Q8N967 AL031848.2-201ENST00000607670 837 ntBASIC17.32■□□□□ 0.36
LRTM2Q8N967 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LRTM2Q8N967 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM2Q8N967 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LRTM2Q8N967 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LRTM2Q8N967 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.32■□□□□ 0.36
LRTM2Q8N967 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LRTM2Q8N967 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRTM2Q8N967 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LRTM2Q8N967 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM2Q8N967 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM2Q8N967 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM2Q8N967 AC133637.1-201ENST00000624115 1537 ntBASIC17.31■□□□□ 0.36
LRTM2Q8N967 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.31■□□□□ 0.36
LRTM2Q8N967 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.31■□□□□ 0.36
LRTM2Q8N967 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LRTM2Q8N967 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.31■□□□□ 0.36
LRTM2Q8N967 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM2Q8N967 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRTM2Q8N967 AC003102.1-202ENST00000563394 1796 ntBASIC17.31■□□□□ 0.36
LRTM2Q8N967 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRTM2Q8N967 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM2Q8N967 AL451085.2-201ENST00000605085 799 ntBASIC17.31■□□□□ 0.36
LRTM2Q8N967 AC092028.1-203ENST00000608262 953 ntBASIC17.31■□□□□ 0.36
LRTM2Q8N967 AC241377.3-202ENST00000626088 1088 ntBASIC17.31■□□□□ 0.36
LRTM2Q8N967 AC241585.3-202ENST00000628937 1088 ntBASIC17.31■□□□□ 0.36
LRTM2Q8N967 AC245100.8-202ENST00000629247 1058 ntBASIC17.31■□□□□ 0.36
LRTM2Q8N967 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM2Q8N967 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM2Q8N967 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM2Q8N967 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.31■□□□□ 0.36
LRTM2Q8N967 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
LRTM2Q8N967 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
LRTM2Q8N967 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.31■□□□□ 0.36
LRTM2Q8N967 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.31■□□□□ 0.36
LRTM2Q8N967 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
LRTM2Q8N967 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM2Q8N967 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.3■□□□□ 0.36
LRTM2Q8N967 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LRTM2Q8N967 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM2Q8N967 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM2Q8N967 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.3■□□□□ 0.36
LRTM2Q8N967 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM2Q8N967 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.3■□□□□ 0.36
LRTM2Q8N967 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
LRTM2Q8N967 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.3■□□□□ 0.36
LRTM2Q8N967 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.3■□□□□ 0.36
LRTM2Q8N967 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.3■□□□□ 0.36
LRTM2Q8N967 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.3■□□□□ 0.36
LRTM2Q8N967 Z92544.1-202ENST00000571933 1220 ntBASIC17.3■□□□□ 0.36
LRTM2Q8N967 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM2Q8N967 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM2Q8N967 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM2Q8N967 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM2Q8N967 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.3■□□□□ 0.36
LRTM2Q8N967 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LRTM2Q8N967 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM2Q8N967 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM2Q8N967 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM2Q8N967 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM2Q8N967 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM2Q8N967 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LRTM2Q8N967 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM2Q8N967 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM2Q8N967 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM2Q8N967 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.29■□□□□ 0.36
LRTM2Q8N967 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.29■□□□□ 0.36
LRTM2Q8N967 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM2Q8N967 AC087239.1-201ENST00000622671 572 ntBASIC17.29■□□□□ 0.36
LRTM2Q8N967 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.29■□□□□ 0.36
LRTM2Q8N967 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
LRTM2Q8N967 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRTM2Q8N967 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRTM2Q8N967 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LRTM2Q8N967 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.29■□□□□ 0.36
LRTM2Q8N967 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.29■□□□□ 0.36
LRTM2Q8N967 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LRTM2Q8N967 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.28■□□□□ 0.36
LRTM2Q8N967 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM2Q8N967 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM2Q8N967 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM2Q8N967 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.28■□□□□ 0.36
LRTM2Q8N967 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM2Q8N967 PLK5-205ENST00000642079 1969 ntBASIC17.28■□□□□ 0.36
LRTM2Q8N967 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM2Q8N967 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM2Q8N967 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM2Q8N967 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LRTM2Q8N967 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.28■□□□□ 0.36
LRTM2Q8N967 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM2Q8N967 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.28■□□□□ 0.36
LRTM2Q8N967 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM2Q8N967 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRTM2Q8N967 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LRTM2Q8N967 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms