Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SLC7A5P2-201ENST00000553010 536 ntBASIC22.94■■□□□ 1.26
VPS52Q8N1B4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.94■■□□□ 1.26
VPS52Q8N1B4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
VPS52Q8N1B4 C1orf229-201ENST00000623686 2258 ntBASIC22.94■■□□□ 1.26
VPS52Q8N1B4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
VPS52Q8N1B4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.94■■□□□ 1.26
VPS52Q8N1B4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS52Q8N1B4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.93■■□□□ 1.26
VPS52Q8N1B4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
VPS52Q8N1B4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS52Q8N1B4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS52Q8N1B4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS52Q8N1B4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS52Q8N1B4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.93■■□□□ 1.26
VPS52Q8N1B4 GUSBP6-202ENST00000438529 1198 ntBASIC22.93■■□□□ 1.26
VPS52Q8N1B4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.93■■□□□ 1.26
VPS52Q8N1B4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.93■■□□□ 1.26
VPS52Q8N1B4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.93■■□□□ 1.26
VPS52Q8N1B4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
VPS52Q8N1B4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.93■■□□□ 1.26
VPS52Q8N1B4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS52Q8N1B4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS52Q8N1B4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.92■■□□□ 1.26
VPS52Q8N1B4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.92■■□□□ 1.26
VPS52Q8N1B4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.92■■□□□ 1.26
VPS52Q8N1B4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.92■■□□□ 1.26
VPS52Q8N1B4 AC233723.2-201ENST00000623798 2106 ntBASIC22.92■■□□□ 1.26
VPS52Q8N1B4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS52Q8N1B4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
VPS52Q8N1B4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS52Q8N1B4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
VPS52Q8N1B4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
VPS52Q8N1B4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
VPS52Q8N1B4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
VPS52Q8N1B4 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.91■■□□□ 1.26
VPS52Q8N1B4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.91■■□□□ 1.26
VPS52Q8N1B4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.91■■□□□ 1.26
VPS52Q8N1B4 TMEM191A-211ENST00000637163 1067 ntBASIC22.91■■□□□ 1.26
VPS52Q8N1B4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
VPS52Q8N1B4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
VPS52Q8N1B4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
VPS52Q8N1B4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 SLC29A4P1-201ENST00000398760 971 ntBASIC22.9■■□□□ 1.26
VPS52Q8N1B4 AC010141.2-201ENST00000452426 721 ntBASIC22.9■■□□□ 1.26
VPS52Q8N1B4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 AL138781.1-201ENST00000566567 1274 ntBASIC22.9■■□□□ 1.26
VPS52Q8N1B4 AC138907.5-202ENST00000569484 235 ntBASIC22.9■■□□□ 1.26
VPS52Q8N1B4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.9■■□□□ 1.26
VPS52Q8N1B4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
VPS52Q8N1B4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
VPS52Q8N1B4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
VPS52Q8N1B4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
VPS52Q8N1B4 CNN2P6-201ENST00000439038 900 ntBASIC22.89■■□□□ 1.25
VPS52Q8N1B4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.89■■□□□ 1.25
VPS52Q8N1B4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.89■■□□□ 1.25
VPS52Q8N1B4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.89■■□□□ 1.25
VPS52Q8N1B4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
VPS52Q8N1B4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
VPS52Q8N1B4 OR7E47P-201ENST00000546390 1422 ntBASIC22.89■■□□□ 1.25
VPS52Q8N1B4 AL117328.2-201ENST00000624617 1940 ntBASIC22.88■■□□□ 1.25
VPS52Q8N1B4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS52Q8N1B4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
VPS52Q8N1B4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS52Q8N1B4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.88■■□□□ 1.25
VPS52Q8N1B4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
VPS52Q8N1B4 KRT18P20-201ENST00000548986 1279 ntBASIC22.88■■□□□ 1.25
VPS52Q8N1B4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.88■■□□□ 1.25
VPS52Q8N1B4 AC010536.3-201ENST00000620306 533 ntBASIC22.88■■□□□ 1.25
VPS52Q8N1B4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.88■■□□□ 1.25
VPS52Q8N1B4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS52Q8N1B4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS52Q8N1B4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
VPS52Q8N1B4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
VPS52Q8N1B4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS52Q8N1B4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
VPS52Q8N1B4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS52Q8N1B4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
VPS52Q8N1B4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS52Q8N1B4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS52Q8N1B4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS52Q8N1B4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
VPS52Q8N1B4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS52Q8N1B4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms