Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE9Q8IYJ1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.96■□□□□ 0.95
CPNE9Q8IYJ1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CPNE9Q8IYJ1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE9Q8IYJ1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE9Q8IYJ1 MIR638-201ENST00000385237 100 ntBASIC20.96■□□□□ 0.95
CPNE9Q8IYJ1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.96■□□□□ 0.95
CPNE9Q8IYJ1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.96■□□□□ 0.95
CPNE9Q8IYJ1 PKD1P6-201ENST00000343738 4769 ntBASIC20.96■□□□□ 0.95
CPNE9Q8IYJ1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE9Q8IYJ1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE9Q8IYJ1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE9Q8IYJ1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.95■□□□□ 0.94
CPNE9Q8IYJ1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE9Q8IYJ1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE9Q8IYJ1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CPNE9Q8IYJ1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.95■□□□□ 0.94
CPNE9Q8IYJ1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.95■□□□□ 0.94
CPNE9Q8IYJ1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.95■□□□□ 0.94
CPNE9Q8IYJ1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE9Q8IYJ1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.95■□□□□ 0.94
CPNE9Q8IYJ1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE9Q8IYJ1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.95■□□□□ 0.94
CPNE9Q8IYJ1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CPNE9Q8IYJ1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE9Q8IYJ1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE9Q8IYJ1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.94■□□□□ 0.94
CPNE9Q8IYJ1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
CPNE9Q8IYJ1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.94■□□□□ 0.94
CPNE9Q8IYJ1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE9Q8IYJ1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.94■□□□□ 0.94
CPNE9Q8IYJ1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE9Q8IYJ1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE9Q8IYJ1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE9Q8IYJ1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE9Q8IYJ1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.94■□□□□ 0.94
CPNE9Q8IYJ1 BX005040.4-201ENST00000637145 1518 ntBASIC20.94■□□□□ 0.94
CPNE9Q8IYJ1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 AC009237.3-201ENST00000393279 1427 ntBASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE9Q8IYJ1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 AC105265.2-201ENST00000467189 838 ntBASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE9Q8IYJ1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 AC012414.1-201ENST00000556676 535 ntBASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 AC005224.4-201ENST00000583262 1652 ntBASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE9Q8IYJ1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE9Q8IYJ1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE9Q8IYJ1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.9■□□□□ 0.94
CPNE9Q8IYJ1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE9Q8IYJ1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.9■□□□□ 0.94
CPNE9Q8IYJ1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.9■□□□□ 0.94
CPNE9Q8IYJ1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.9■□□□□ 0.94
CPNE9Q8IYJ1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE9Q8IYJ1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE9Q8IYJ1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms