Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 DUX4L8-201ENST00000629013 1275 ntBASIC20.52■□□□□ 0.88
LRRC56Q8IYG6 DUX4L3-201ENST00000630187 1275 ntBASIC20.52■□□□□ 0.88
LRRC56Q8IYG6 DUX4L7-201ENST00000630678 1275 ntBASIC20.52■□□□□ 0.88
LRRC56Q8IYG6 DUX4L5-201ENST00000630834 1275 ntBASIC20.52■□□□□ 0.88
LRRC56Q8IYG6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LRRC56Q8IYG6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC56Q8IYG6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC56Q8IYG6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC56Q8IYG6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC56Q8IYG6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 AC087623.3-201ENST00000607047 1098 ntBASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRC56Q8IYG6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 RARRES2P6-201ENST00000567333 442 ntBASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC56Q8IYG6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 KRT87P-202ENST00000534226 1464 ntBASIC20.49■□□□□ 0.87
LRRC56Q8IYG6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 KRT18P61-201ENST00000585825 1298 ntBASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 AC053503.5-201ENST00000601508 636 ntBASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
LRRC56Q8IYG6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRC56Q8IYG6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC56Q8IYG6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC56Q8IYG6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC56Q8IYG6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRC56Q8IYG6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC56Q8IYG6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.47■□□□□ 0.87
LRRC56Q8IYG6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms