Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 AC006015.1-201ENST00000429970 570 ntBASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 KRT18P11-201ENST00000435214 1283 ntBASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 RARRES2P11-201ENST00000635158 484 ntBASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 AC080038.3-201ENST00000623346 1952 ntBASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 BID-214ENST00000617586 542 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM48Q8IWZ4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 AC090192.1-201ENST00000517740 490 ntBASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 AP001160.3-201ENST00000601484 763 ntBASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM48Q8IWZ4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM48Q8IWZ4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 AC092053.2-201ENST00000640557 1818 ntBASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRIM48Q8IWZ4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms