Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PACS2Q86VP3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.21■□□□□ 0.99
PACS2Q86VP3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.21■□□□□ 0.99
PACS2Q86VP3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PACS2Q86VP3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PACS2Q86VP3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.21■□□□□ 0.99
PACS2Q86VP3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.21■□□□□ 0.99
PACS2Q86VP3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
PACS2Q86VP3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.21■□□□□ 0.99
PACS2Q86VP3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.21■□□□□ 0.99
PACS2Q86VP3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PACS2Q86VP3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.21■□□□□ 0.99
PACS2Q86VP3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.21■□□□□ 0.99
PACS2Q86VP3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PACS2Q86VP3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.21■□□□□ 0.99
PACS2Q86VP3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PACS2Q86VP3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PACS2Q86VP3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PACS2Q86VP3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PACS2Q86VP3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.2■□□□□ 0.99
PACS2Q86VP3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PACS2Q86VP3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PACS2Q86VP3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PACS2Q86VP3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PACS2Q86VP3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PACS2Q86VP3 TSPY9P-201ENST00000440215 945 ntBASIC21.2■□□□□ 0.98
PACS2Q86VP3 TSPY11P-201ENST00000442607 1045 ntBASIC21.2■□□□□ 0.98
PACS2Q86VP3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PACS2Q86VP3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PACS2Q86VP3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PACS2Q86VP3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PACS2Q86VP3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PACS2Q86VP3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PACS2Q86VP3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PACS2Q86VP3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.19■□□□□ 0.98
PACS2Q86VP3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PACS2Q86VP3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PACS2Q86VP3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PACS2Q86VP3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PACS2Q86VP3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PACS2Q86VP3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PACS2Q86VP3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.19■□□□□ 0.98
PACS2Q86VP3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PACS2Q86VP3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.19■□□□□ 0.98
PACS2Q86VP3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PACS2Q86VP3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS2Q86VP3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS2Q86VP3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PACS2Q86VP3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS2Q86VP3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS2Q86VP3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS2Q86VP3 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.18■□□□□ 0.98
PACS2Q86VP3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.18■□□□□ 0.98
PACS2Q86VP3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.18■□□□□ 0.98
PACS2Q86VP3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS2Q86VP3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS2Q86VP3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.18■□□□□ 0.98
PACS2Q86VP3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
PACS2Q86VP3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS2Q86VP3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PACS2Q86VP3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
PACS2Q86VP3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.17■□□□□ 0.98
PACS2Q86VP3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.17■□□□□ 0.98
PACS2Q86VP3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS2Q86VP3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.17■□□□□ 0.98
PACS2Q86VP3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PACS2Q86VP3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS2Q86VP3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS2Q86VP3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.17■□□□□ 0.98
PACS2Q86VP3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.17■□□□□ 0.98
PACS2Q86VP3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS2Q86VP3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.17■□□□□ 0.98
PACS2Q86VP3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.17■□□□□ 0.98
PACS2Q86VP3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.17■□□□□ 0.98
PACS2Q86VP3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS2Q86VP3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PACS2Q86VP3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.16■□□□□ 0.98
PACS2Q86VP3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS2Q86VP3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS2Q86VP3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PACS2Q86VP3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.16■□□□□ 0.98
PACS2Q86VP3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PACS2Q86VP3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PACS2Q86VP3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.16■□□□□ 0.98
PACS2Q86VP3 AL356441.2-201ENST00000443009 864 ntBASIC21.16■□□□□ 0.98
PACS2Q86VP3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
PACS2Q86VP3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PACS2Q86VP3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
PACS2Q86VP3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PACS2Q86VP3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PACS2Q86VP3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PACS2Q86VP3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PACS2Q86VP3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PACS2Q86VP3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.15■□□□□ 0.98
PACS2Q86VP3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PACS2Q86VP3 KRT16P3-201ENST00000439127 1283 ntBASIC21.15■□□□□ 0.98
PACS2Q86VP3 UNC93B8-201ENST00000511903 705 ntBASIC21.15■□□□□ 0.98
PACS2Q86VP3 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.15■□□□□ 0.98
PACS2Q86VP3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.15■□□□□ 0.98
PACS2Q86VP3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms