Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AL162412.1-201ENST00000567129 965 ntBASIC18.11■□□□□ 0.49
CSMD2Q7Z408 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.1■□□□□ 0.49
CSMD2Q7Z408 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSMD2Q7Z408 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 CYP2T3P-201ENST00000601990 817 ntBASIC18.09■□□□□ 0.49
CSMD2Q7Z408 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 KRT17P1-201ENST00000399211 1546 ntBASIC18.09■□□□□ 0.49
CSMD2Q7Z408 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 TSPY15P-201ENST00000457163 923 ntBASIC18.09■□□□□ 0.49
CSMD2Q7Z408 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.09■□□□□ 0.49
CSMD2Q7Z408 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.08■□□□□ 0.49
CSMD2Q7Z408 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSMD2Q7Z408 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.08■□□□□ 0.49
CSMD2Q7Z408 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.08■□□□□ 0.49
CSMD2Q7Z408 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.08■□□□□ 0.49
CSMD2Q7Z408 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.08■□□□□ 0.49
CSMD2Q7Z408 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CSMD2Q7Z408 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.08■□□□□ 0.49
CSMD2Q7Z408 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.08■□□□□ 0.49
CSMD2Q7Z408 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSMD2Q7Z408 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 TSPY7P-201ENST00000431358 1114 ntBASIC18.07■□□□□ 0.48
CSMD2Q7Z408 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.07■□□□□ 0.48
CSMD2Q7Z408 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.06■□□□□ 0.48
CSMD2Q7Z408 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD2Q7Z408 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.06■□□□□ 0.48
CSMD2Q7Z408 EEF1DP3-203ENST00000566025 782 ntBASIC18.06■□□□□ 0.48
CSMD2Q7Z408 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD2Q7Z408 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD2Q7Z408 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD2Q7Z408 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD2Q7Z408 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.06■□□□□ 0.48
CSMD2Q7Z408 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD2Q7Z408 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.06■□□□□ 0.48
CSMD2Q7Z408 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD2Q7Z408 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD2Q7Z408 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms