Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC13.92□□□□□ -0.18
SCXQ7RTU7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCXQ7RTU7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCXQ7RTU7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCXQ7RTU7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCXQ7RTU7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCXQ7RTU7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SCXQ7RTU7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SCXQ7RTU7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCXQ7RTU7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SCXQ7RTU7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.92□□□□□ -0.18
SCXQ7RTU7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.92□□□□□ -0.18
SCXQ7RTU7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC13.92□□□□□ -0.18
SCXQ7RTU7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
SCXQ7RTU7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.92□□□□□ -0.18
SCXQ7RTU7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SCXQ7RTU7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC13.92□□□□□ -0.18
SCXQ7RTU7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCXQ7RTU7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCXQ7RTU7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCXQ7RTU7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCXQ7RTU7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SCXQ7RTU7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.92□□□□□ -0.18
SCXQ7RTU7 AL353803.4-201ENST00000565882 1934 ntBASIC13.92□□□□□ -0.18
SCXQ7RTU7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SCXQ7RTU7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SCXQ7RTU7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.91□□□□□ -0.18
SCXQ7RTU7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SCXQ7RTU7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
SCXQ7RTU7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SCXQ7RTU7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SCXQ7RTU7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SCXQ7RTU7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SCXQ7RTU7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SCXQ7RTU7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SCXQ7RTU7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SCXQ7RTU7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.91□□□□□ -0.18
SCXQ7RTU7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SCXQ7RTU7 AC004911.1-201ENST00000416316 871 ntBASIC13.91□□□□□ -0.18
SCXQ7RTU7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SCXQ7RTU7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SCXQ7RTU7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SCXQ7RTU7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SCXQ7RTU7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SCXQ7RTU7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
SCXQ7RTU7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SCXQ7RTU7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SCXQ7RTU7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SCXQ7RTU7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SCXQ7RTU7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SCXQ7RTU7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SCXQ7RTU7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.9□□□□□ -0.18
SCXQ7RTU7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SCXQ7RTU7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SCXQ7RTU7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SCXQ7RTU7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.9□□□□□ -0.18
SCXQ7RTU7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC13.9□□□□□ -0.18
SCXQ7RTU7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SCXQ7RTU7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SCXQ7RTU7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SCXQ7RTU7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SCXQ7RTU7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.9□□□□□ -0.18
SCXQ7RTU7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC13.9□□□□□ -0.18
SCXQ7RTU7 AC087239.1-201ENST00000622671 572 ntBASIC13.9□□□□□ -0.18
SCXQ7RTU7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SCXQ7RTU7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SCXQ7RTU7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SCXQ7RTU7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SCXQ7RTU7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SCXQ7RTU7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SCXQ7RTU7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC13.9□□□□□ -0.19
SCXQ7RTU7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC13.9□□□□□ -0.19
SCXQ7RTU7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SCXQ7RTU7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.9□□□□□ -0.19
SCXQ7RTU7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SCXQ7RTU7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC13.89□□□□□ -0.19
SCXQ7RTU7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC13.89□□□□□ -0.19
SCXQ7RTU7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCXQ7RTU7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SCXQ7RTU7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCXQ7RTU7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCXQ7RTU7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC13.89□□□□□ -0.19
SCXQ7RTU7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC13.89□□□□□ -0.19
SCXQ7RTU7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCXQ7RTU7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
SCXQ7RTU7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCXQ7RTU7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCXQ7RTU7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SCXQ7RTU7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCXQ7RTU7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SCXQ7RTU7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCXQ7RTU7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms