Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf88Q6PI97 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
C11orf88Q6PI97 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C11orf88Q6PI97 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C11orf88Q6PI97 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
C11orf88Q6PI97 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C11orf88Q6PI97 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
C11orf88Q6PI97 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.33■□□□□ 0.52
C11orf88Q6PI97 AC004448.1-201ENST00000458332 883 ntBASIC18.33■□□□□ 0.52
C11orf88Q6PI97 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C11orf88Q6PI97 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.33■□□□□ 0.52
C11orf88Q6PI97 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
C11orf88Q6PI97 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.33■□□□□ 0.52
C11orf88Q6PI97 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C11orf88Q6PI97 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C11orf88Q6PI97 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
C11orf88Q6PI97 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C11orf88Q6PI97 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 AC090340.1-201ENST00000620778 4980 ntBASIC18.32■□□□□ 0.52
C11orf88Q6PI97 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
C11orf88Q6PI97 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 AC244015.2-201ENST00000616358 1861 ntBASIC18.31■□□□□ 0.52
C11orf88Q6PI97 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
C11orf88Q6PI97 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 MIR638-201ENST00000385237 100 ntBASIC18.3■□□□□ 0.52
C11orf88Q6PI97 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf88Q6PI97 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 AC133561.4-201ENST00000566112 224 ntBASIC18.29■□□□□ 0.52
C11orf88Q6PI97 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms