Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 AC128676.1-201ENST00000454392 318 ntBASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 AC142381.4-202ENST00000563973 229 ntBASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.97■□□□□ 0.95
LYSMD4Q5XG99 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD4Q5XG99 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.96■□□□□ 0.95
LYSMD4Q5XG99 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.96■□□□□ 0.95
LYSMD4Q5XG99 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.96■□□□□ 0.95
LYSMD4Q5XG99 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.96■□□□□ 0.95
LYSMD4Q5XG99 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD4Q5XG99 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.96■□□□□ 0.95
LYSMD4Q5XG99 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LYSMD4Q5XG99 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LYSMD4Q5XG99 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LYSMD4Q5XG99 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LYSMD4Q5XG99 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LYSMD4Q5XG99 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LYSMD4Q5XG99 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.94■□□□□ 0.94
LYSMD4Q5XG99 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LYSMD4Q5XG99 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.94■□□□□ 0.94
LYSMD4Q5XG99 AC243732.1-201ENST00000612648 864 ntBASIC20.94■□□□□ 0.94
LYSMD4Q5XG99 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LYSMD4Q5XG99 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LYSMD4Q5XG99 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LYSMD4Q5XG99 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 RPS2P4-201ENST00000476944 856 ntBASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LYSMD4Q5XG99 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 LSM12P1-201ENST00000411836 588 ntBASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 AC026366.1-201ENST00000488803 879 ntBASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.92■□□□□ 0.94
LYSMD4Q5XG99 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LYSMD4Q5XG99 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LYSMD4Q5XG99 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LYSMD4Q5XG99 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LYSMD4Q5XG99 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.91■□□□□ 0.94
LYSMD4Q5XG99 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
LYSMD4Q5XG99 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.91■□□□□ 0.94
LYSMD4Q5XG99 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.91■□□□□ 0.94
LYSMD4Q5XG99 UNC93B5-201ENST00000530315 699 ntBASIC20.91■□□□□ 0.94
LYSMD4Q5XG99 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.91■□□□□ 0.94
LYSMD4Q5XG99 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.91■□□□□ 0.94
LYSMD4Q5XG99 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LYSMD4Q5XG99 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LYSMD4Q5XG99 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LYSMD4Q5XG99 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms