Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 GUSBP5-201ENST00000418136 578 ntBASIC20.31■□□□□ 0.84
RNF220Q5VTB9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 AL117332.1-201ENST00000622628 974 ntBASIC20.31■□□□□ 0.84
RNF220Q5VTB9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF220Q5VTB9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 AFG3L1P-217ENST00000557444 2447 ntBASIC20.3■□□□□ 0.84
RNF220Q5VTB9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF220Q5VTB9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF220Q5VTB9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RNF220Q5VTB9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF220Q5VTB9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF220Q5VTB9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF220Q5VTB9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF220Q5VTB9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF220Q5VTB9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF220Q5VTB9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RNF220Q5VTB9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 FEM1AP4-201ENST00000443167 1987 ntBASIC20.27■□□□□ 0.84
RNF220Q5VTB9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 AL499627.2-201ENST00000606283 725 ntBASIC20.27■□□□□ 0.84
RNF220Q5VTB9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF220Q5VTB9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.27■□□□□ 0.83
RNF220Q5VTB9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
RNF220Q5VTB9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF220Q5VTB9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF220Q5VTB9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.27■□□□□ 0.83
RNF220Q5VTB9 LINC01960-201ENST00000563759 1884 ntBASIC20.26■□□□□ 0.83
RNF220Q5VTB9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF220Q5VTB9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF220Q5VTB9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF220Q5VTB9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF220Q5VTB9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF220Q5VTB9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF220Q5VTB9 AC241377.3-202ENST00000626088 1088 ntBASIC20.26■□□□□ 0.83
RNF220Q5VTB9 AC241585.3-202ENST00000628937 1088 ntBASIC20.26■□□□□ 0.83
RNF220Q5VTB9 AC245100.8-202ENST00000629247 1058 ntBASIC20.26■□□□□ 0.83
RNF220Q5VTB9 AC004687.1-201ENST00000579003 1625 ntBASIC20.26■□□□□ 0.83
RNF220Q5VTB9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms