Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 ERN1-208ENST00000606895 2068 ntBASIC11.85□□□□□ -0.51
UBR4Q5T4S7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 AL023875.1-201ENST00000640777 796 ntBASIC11.85□□□□□ -0.51
UBR4Q5T4S7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
UBR4Q5T4S7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 CYP2D8P-201ENST00000433633 1490 ntBASIC11.83□□□□□ -0.52
UBR4Q5T4S7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 LSM12P1-201ENST00000411836 588 ntBASIC11.83□□□□□ -0.52
UBR4Q5T4S7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 NME6-213ENST00000451657 871 ntTSL 2 BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 AC026471.5-201ENST00000615068 467 ntBASIC11.83□□□□□ -0.52
UBR4Q5T4S7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC11.83□□□□□ -0.52
UBR4Q5T4S7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
UBR4Q5T4S7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC11.82□□□□□ -0.52
UBR4Q5T4S7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC11.82□□□□□ -0.52
UBR4Q5T4S7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
UBR4Q5T4S7 AC246785.2-201ENST00000432512 513 ntBASIC11.82□□□□□ -0.52
UBR4Q5T4S7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBR4Q5T4S7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBR4Q5T4S7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UBR4Q5T4S7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC11.82□□□□□ -0.52
UBR4Q5T4S7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC11.82□□□□□ -0.52
UBR4Q5T4S7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC11.82□□□□□ -0.52
UBR4Q5T4S7 MTDHP1-201ENST00000605323 784 ntBASIC11.82□□□□□ -0.52
UBR4Q5T4S7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC11.82□□□□□ -0.52
UBR4Q5T4S7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBR4Q5T4S7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.82□□□□□ -0.52
UBR4Q5T4S7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC11.82□□□□□ -0.52
UBR4Q5T4S7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 KRT18P22-201ENST00000402024 1347 ntBASIC11.81□□□□□ -0.52
UBR4Q5T4S7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 AL691432.3-201ENST00000621860 400 ntBASIC11.81□□□□□ -0.52
UBR4Q5T4S7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 OXCT2P1-201ENST00000447263 1535 ntBASIC11.81□□□□□ -0.52
UBR4Q5T4S7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 213 ms