Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.57■□□□□ 0.88
SGO1Q5FBB7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SGO1Q5FBB7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SGO1Q5FBB7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.57■□□□□ 0.88
SGO1Q5FBB7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.57■□□□□ 0.88
SGO1Q5FBB7 AL034346.1-201ENST00000568244 1277 ntBASIC20.57■□□□□ 0.88
SGO1Q5FBB7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SGO1Q5FBB7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SGO1Q5FBB7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.57■□□□□ 0.88
SGO1Q5FBB7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SGO1Q5FBB7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SGO1Q5FBB7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SGO1Q5FBB7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SGO1Q5FBB7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SGO1Q5FBB7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SGO1Q5FBB7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SGO1Q5FBB7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.55■□□□□ 0.88
SGO1Q5FBB7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SGO1Q5FBB7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.55■□□□□ 0.88
SGO1Q5FBB7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.55■□□□□ 0.88
SGO1Q5FBB7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SGO1Q5FBB7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SGO1Q5FBB7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.55■□□□□ 0.88
SGO1Q5FBB7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SGO1Q5FBB7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 AC099791.1-201ENST00000416440 715 ntBASIC20.54■□□□□ 0.88
SGO1Q5FBB7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 SMUG1P1-201ENST00000590640 811 ntBASIC20.54■□□□□ 0.88
SGO1Q5FBB7 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.54■□□□□ 0.88
SGO1Q5FBB7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 AC003102.1-202ENST00000563394 1796 ntBASIC20.54■□□□□ 0.88
SGO1Q5FBB7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SGO1Q5FBB7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SGO1Q5FBB7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SGO1Q5FBB7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SGO1Q5FBB7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SGO1Q5FBB7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.53■□□□□ 0.88
SGO1Q5FBB7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
SGO1Q5FBB7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SGO1Q5FBB7 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.53■□□□□ 0.88
SGO1Q5FBB7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SGO1Q5FBB7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SGO1Q5FBB7 FEM1AP4-201ENST00000443167 1987 ntBASIC20.53■□□□□ 0.88
SGO1Q5FBB7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.53■□□□□ 0.88
SGO1Q5FBB7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.52■□□□□ 0.88
SGO1Q5FBB7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.52■□□□□ 0.88
SGO1Q5FBB7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SGO1Q5FBB7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
SGO1Q5FBB7 AC133561.4-201ENST00000566112 224 ntBASIC20.52■□□□□ 0.88
SGO1Q5FBB7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.52■□□□□ 0.88
SGO1Q5FBB7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SGO1Q5FBB7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SGO1Q5FBB7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SGO1Q5FBB7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SGO1Q5FBB7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SGO1Q5FBB7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SGO1Q5FBB7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SGO1Q5FBB7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SGO1Q5FBB7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.52■□□□□ 0.87
SGO1Q5FBB7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms