Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35AQ53FP2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35AQ53FP2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TMEM35AQ53FP2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM35AQ53FP2 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.18■□□□□ 0.82
TMEM35AQ53FP2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35AQ53FP2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35AQ53FP2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35AQ53FP2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35AQ53FP2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35AQ53FP2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM35AQ53FP2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35AQ53FP2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35AQ53FP2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35AQ53FP2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35AQ53FP2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35AQ53FP2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35AQ53FP2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35AQ53FP2 AC079140.4-201ENST00000507448 529 ntBASIC20.17■□□□□ 0.82
TMEM35AQ53FP2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35AQ53FP2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35AQ53FP2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEM35AQ53FP2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35AQ53FP2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35AQ53FP2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 Z98882.1-201ENST00000622160 2253 ntBASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35AQ53FP2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 AC053503.5-201ENST00000601508 636 ntBASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TMEM35AQ53FP2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 KRT87P-202ENST00000534226 1464 ntBASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 EEF1DP3-203ENST00000566025 782 ntBASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 TERF1P2-201ENST00000583350 1212 ntBASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35AQ53FP2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TMEM35AQ53FP2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms