Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC30.8■■■□□ 2.52
SPHKAPQ2M3C7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
SPHKAPQ2M3C7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC30.8■■■□□ 2.52
SPHKAPQ2M3C7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SPHKAPQ2M3C7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SPHKAPQ2M3C7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
SPHKAPQ2M3C7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
SPHKAPQ2M3C7 RNA5SP413-201ENST00000516373 109 ntBASIC30.8■■■□□ 2.52
SPHKAPQ2M3C7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC30.8■■■□□ 2.52
SPHKAPQ2M3C7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC30.8■■■□□ 2.52
SPHKAPQ2M3C7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SPHKAPQ2M3C7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC30.8■■■□□ 2.52
SPHKAPQ2M3C7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SPHKAPQ2M3C7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SPHKAPQ2M3C7 AL512625.2-201ENST00000417533 625 ntBASIC30.79■■■□□ 2.52
SPHKAPQ2M3C7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SPHKAPQ2M3C7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
SPHKAPQ2M3C7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC30.79■■■□□ 2.52
SPHKAPQ2M3C7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC30.78■■■□□ 2.52
SPHKAPQ2M3C7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
SPHKAPQ2M3C7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SPHKAPQ2M3C7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC30.78■■■□□ 2.52
SPHKAPQ2M3C7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SPHKAPQ2M3C7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
SPHKAPQ2M3C7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC30.78■■■□□ 2.52
SPHKAPQ2M3C7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC30.78■■■□□ 2.52
SPHKAPQ2M3C7 AC003102.1-202ENST00000563394 1796 ntBASIC30.78■■■□□ 2.52
SPHKAPQ2M3C7 BX276092.2-201ENST00000417668 665 ntBASIC30.78■■■□□ 2.52
SPHKAPQ2M3C7 RARRES2P4-201ENST00000514074 484 ntBASIC30.78■■■□□ 2.52
SPHKAPQ2M3C7 MIR4758-201ENST00000577688 71 ntBASIC30.78■■■□□ 2.52
SPHKAPQ2M3C7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC30.77■■■□□ 2.52
SPHKAPQ2M3C7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC30.77■■■□□ 2.52
SPHKAPQ2M3C7 AC066615.1-201ENST00000640911 628 ntBASIC30.77■■■□□ 2.52
SPHKAPQ2M3C7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC30.77■■■□□ 2.52
SPHKAPQ2M3C7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SPHKAPQ2M3C7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SPHKAPQ2M3C7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
SPHKAPQ2M3C7 DUSP5P2-201ENST00000426873 1033 ntBASIC30.76■■■□□ 2.52
SPHKAPQ2M3C7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
SPHKAPQ2M3C7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
SPHKAPQ2M3C7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
SPHKAPQ2M3C7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC30.76■■■□□ 2.51
SPHKAPQ2M3C7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
SPHKAPQ2M3C7 AC010980.2-201ENST00000587099 1412 ntBASIC30.76■■■□□ 2.51
SPHKAPQ2M3C7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
SPHKAPQ2M3C7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC30.76■■■□□ 2.51
SPHKAPQ2M3C7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC30.76■■■□□ 2.51
SPHKAPQ2M3C7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SPHKAPQ2M3C7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SPHKAPQ2M3C7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC30.75■■■□□ 2.51
SPHKAPQ2M3C7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SPHKAPQ2M3C7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC30.75■■■□□ 2.51
SPHKAPQ2M3C7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC30.75■■■□□ 2.51
SPHKAPQ2M3C7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC30.75■■■□□ 2.51
SPHKAPQ2M3C7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
SPHKAPQ2M3C7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SPHKAPQ2M3C7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SPHKAPQ2M3C7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SPHKAPQ2M3C7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC30.74■■■□□ 2.51
SPHKAPQ2M3C7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC30.74■■■□□ 2.51
SPHKAPQ2M3C7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC30.74■■■□□ 2.51
SPHKAPQ2M3C7 POU5F1P3-201ENST00000428824 1078 ntBASIC30.74■■■□□ 2.51
SPHKAPQ2M3C7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC30.74■■■□□ 2.51
SPHKAPQ2M3C7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC30.74■■■□□ 2.51
SPHKAPQ2M3C7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
SPHKAPQ2M3C7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SPHKAPQ2M3C7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SPHKAPQ2M3C7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC30.73■■■□□ 2.51
SPHKAPQ2M3C7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
SPHKAPQ2M3C7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SPHKAPQ2M3C7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SPHKAPQ2M3C7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SPHKAPQ2M3C7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SPHKAPQ2M3C7 ITM2C-210ENST00000620962 501 ntBASIC30.73■■■□□ 2.51
SPHKAPQ2M3C7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SPHKAPQ2M3C7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC30.73■■■□□ 2.51
SPHKAPQ2M3C7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC30.72■■■□□ 2.51
SPHKAPQ2M3C7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SPHKAPQ2M3C7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SPHKAPQ2M3C7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC30.72■■■□□ 2.51
SPHKAPQ2M3C7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SPHKAPQ2M3C7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
SPHKAPQ2M3C7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SPHKAPQ2M3C7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SPHKAPQ2M3C7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC30.72■■■□□ 2.51
SPHKAPQ2M3C7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SPHKAPQ2M3C7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SPHKAPQ2M3C7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC30.72■■■□□ 2.51
SPHKAPQ2M3C7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC30.72■■■□□ 2.51
SPHKAPQ2M3C7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
SPHKAPQ2M3C7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SPHKAPQ2M3C7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SPHKAPQ2M3C7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SPHKAPQ2M3C7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC30.71■■■□□ 2.51
SPHKAPQ2M3C7 AC098590.1-201ENST00000468126 897 ntBASIC30.71■■■□□ 2.51
SPHKAPQ2M3C7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC30.71■■■□□ 2.51
SPHKAPQ2M3C7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC30.71■■■□□ 2.51
SPHKAPQ2M3C7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC30.71■■■□□ 2.51
SPHKAPQ2M3C7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
SPHKAPQ2M3C7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms