Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.74■□□□□ 0.91
RSPO4Q2I0M5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
RSPO4Q2I0M5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RSPO4Q2I0M5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RSPO4Q2I0M5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
RSPO4Q2I0M5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.73■□□□□ 0.91
RSPO4Q2I0M5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.73■□□□□ 0.91
RSPO4Q2I0M5 AC233702.5-201ENST00000584107 538 ntBASIC20.73■□□□□ 0.91
RSPO4Q2I0M5 AL591742.1-201ENST00000604433 565 ntBASIC20.73■□□□□ 0.91
RSPO4Q2I0M5 AC012306.2-201ENST00000609350 630 ntBASIC20.73■□□□□ 0.91
RSPO4Q2I0M5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.73■□□□□ 0.91
RSPO4Q2I0M5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RSPO4Q2I0M5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RSPO4Q2I0M5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RSPO4Q2I0M5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 AL162412.1-201ENST00000567129 965 ntBASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 AC233263.1-201ENST00000578059 224 ntBASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 HLA-B-256ENST00000639848 1089 ntBASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RSPO4Q2I0M5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 RPS2P55-201ENST00000397318 883 ntBASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 AC107956.1-201ENST00000494359 873 ntBASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 PRKY-204ENST00000533551 1019 ntBASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 RN7SL850P-201ENST00000579959 291 ntBASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 CD177P1-201ENST00000606252 935 ntBASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.71■□□□□ 0.91
RSPO4Q2I0M5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RSPO4Q2I0M5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
RSPO4Q2I0M5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 TSPY15P-201ENST00000457163 923 ntBASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RSPO4Q2I0M5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RSPO4Q2I0M5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RSPO4Q2I0M5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.69■□□□□ 0.9
RSPO4Q2I0M5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.69■□□□□ 0.9
RSPO4Q2I0M5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.69■□□□□ 0.9
RSPO4Q2I0M5 C2orf69P4-201ENST00000565394 541 ntBASIC20.69■□□□□ 0.9
RSPO4Q2I0M5 AL590326.2-201ENST00000625139 305 ntBASIC20.69■□□□□ 0.9
RSPO4Q2I0M5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RSPO4Q2I0M5 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RSPO4Q2I0M5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.69■□□□□ 0.9
RSPO4Q2I0M5 AC022211.4-201ENST00000625094 2161 ntBASIC20.69■□□□□ 0.9
RSPO4Q2I0M5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RSPO4Q2I0M5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 AL049597.2-201ENST00000565575 961 ntBASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 EEF1DP3-203ENST00000566025 782 ntBASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 AC120498.10-201ENST00000621827 505 ntBASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RSPO4Q2I0M5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms