Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
SF3A2Q15428 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SF3A2Q15428 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SF3A2Q15428 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SF3A2Q15428 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.03■□□□□ 0.96
SF3A2Q15428 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.02■□□□□ 0.96
SF3A2Q15428 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.02■□□□□ 0.96
SF3A2Q15428 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.02■□□□□ 0.96
SF3A2Q15428 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.02■□□□□ 0.96
SF3A2Q15428 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SF3A2Q15428 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.02■□□□□ 0.96
SF3A2Q15428 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SF3A2Q15428 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SF3A2Q15428 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.02■□□□□ 0.96
SF3A2Q15428 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.02■□□□□ 0.96
SF3A2Q15428 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SF3A2Q15428 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.02■□□□□ 0.96
SF3A2Q15428 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SF3A2Q15428 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SF3A2Q15428 ECEL1P3-201ENST00000427961 737 ntBASIC21.02■□□□□ 0.96
SF3A2Q15428 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.02■□□□□ 0.96
SF3A2Q15428 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SF3A2Q15428 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SF3A2Q15428 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SF3A2Q15428 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SF3A2Q15428 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
SF3A2Q15428 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SF3A2Q15428 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.01■□□□□ 0.95
SF3A2Q15428 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SF3A2Q15428 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SF3A2Q15428 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.01■□□□□ 0.95
SF3A2Q15428 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.01■□□□□ 0.95
SF3A2Q15428 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.01■□□□□ 0.95
SF3A2Q15428 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SF3A2Q15428 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.01■□□□□ 0.95
SF3A2Q15428 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SF3A2Q15428 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SF3A2Q15428 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SF3A2Q15428 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SF3A2Q15428 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21■□□□□ 0.95
SF3A2Q15428 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SF3A2Q15428 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21■□□□□ 0.95
SF3A2Q15428 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SF3A2Q15428 OR2A1-AS1-201ENST00000462305 773 ntBASIC21■□□□□ 0.95
SF3A2Q15428 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21■□□□□ 0.95
SF3A2Q15428 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21■□□□□ 0.95
SF3A2Q15428 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21■□□□□ 0.95
SF3A2Q15428 UNC93B5-201ENST00000530315 699 ntBASIC21■□□□□ 0.95
SF3A2Q15428 AP003097.1-201ENST00000530657 1135 ntBASIC21■□□□□ 0.95
SF3A2Q15428 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21■□□□□ 0.95
SF3A2Q15428 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SF3A2Q15428 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SF3A2Q15428 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21■□□□□ 0.95
SF3A2Q15428 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SF3A2Q15428 H19-210ENST00000439725 1929 ntTSL 2 BASIC21■□□□□ 0.95
SF3A2Q15428 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SF3A2Q15428 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SF3A2Q15428 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SF3A2Q15428 AP004607.7-201ENST00000527152 1677 ntBASIC20.99■□□□□ 0.95
SF3A2Q15428 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.99■□□□□ 0.95
SF3A2Q15428 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SF3A2Q15428 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SF3A2Q15428 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
SF3A2Q15428 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SF3A2Q15428 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.99■□□□□ 0.95
SF3A2Q15428 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.99■□□□□ 0.95
SF3A2Q15428 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SF3A2Q15428 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
SF3A2Q15428 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.99■□□□□ 0.95
SF3A2Q15428 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SF3A2Q15428 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.99■□□□□ 0.95
SF3A2Q15428 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.99■□□□□ 0.95
SF3A2Q15428 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SF3A2Q15428 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
SF3A2Q15428 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SF3A2Q15428 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SF3A2Q15428 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SF3A2Q15428 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SF3A2Q15428 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SF3A2Q15428 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SF3A2Q15428 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SF3A2Q15428 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SF3A2Q15428 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SF3A2Q15428 UBE2SP1-201ENST00000450587 669 ntBASIC20.98■□□□□ 0.95
SF3A2Q15428 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.98■□□□□ 0.95
SF3A2Q15428 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.98■□□□□ 0.95
SF3A2Q15428 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.98■□□□□ 0.95
SF3A2Q15428 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.97■□□□□ 0.95
SF3A2Q15428 AC010980.2-201ENST00000587099 1412 ntBASIC20.97■□□□□ 0.95
SF3A2Q15428 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SF3A2Q15428 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SF3A2Q15428 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SF3A2Q15428 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.97■□□□□ 0.95
SF3A2Q15428 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SF3A2Q15428 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.97■□□□□ 0.95
SF3A2Q15428 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.97■□□□□ 0.95
SF3A2Q15428 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.97■□□□□ 0.95
SF3A2Q15428 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SF3A2Q15428 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.97■□□□□ 0.95
SF3A2Q15428 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms