Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 PEX5YDR244W 1839 nt1.82□□□□□ -2.12
VPS13Q07878 KIN82YCR091W 2163 nt1.82□□□□□ -2.12
VPS13Q07878 YCL068CYCL068C 783 nt1.82□□□□□ -2.12
VPS13Q07878 MRPL17YNL252C 846 nt1.82□□□□□ -2.12
VPS13Q07878 YEL043WYEL043W 2871 nt1.81□□□□□ -2.12
VPS13Q07878 BNA4YBL098W 1383 nt1.81□□□□□ -2.12
VPS13Q07878 YHR193C-AYHR193C-A 375 nt1.81□□□□□ -2.12
VPS13Q07878 VPS13YLL040C 9435 nt1.81□□□□□ -2.12
VPS13Q07878 CAF130YGR134W 3369 nt1.81□□□□□ -2.12
VPS13Q07878 TAO3YIL129C 7131 nt1.81□□□□□ -2.12
VPS13Q07878 ISW1YBR245C 3390 nt1.81□□□□□ -2.12
VPS13Q07878 FMP33YJL161W 543 nt1.8□□□□□ -2.12
VPS13Q07878 TRX1YLR043C 312 nt1.8□□□□□ -2.12
VPS13Q07878 YFR016CYFR016C 3702 nt1.8□□□□□ -2.12
VPS13Q07878 FZO1YBR179C 2568 nt1.8□□□□□ -2.12
VPS13Q07878 STT4YLR305C 5703 nt1.8□□□□□ -2.12
VPS13Q07878 CDC37YDR168W 1521 nt1.8□□□□□ -2.12
VPS13Q07878 UBP8YMR223W 1416 nt1.8□□□□□ -2.12
VPS13Q07878 FRQ1YDR373W 573 nt1.8□□□□□ -2.12
VPS13Q07878 YML096WYML096W 1578 nt1.79□□□□□ -2.12
VPS13Q07878 YML119WYML119W 1074 nt1.79□□□□□ -2.12
VPS13Q07878 RPS11BYBR048W 471 nt1.79□□□□□ -2.12
VPS13Q07878 GIP4YAL031C 2283 nt1.79□□□□□ -2.12
VPS13Q07878 PHO12YHR215W 1404 nt1.79□□□□□ -2.12
VPS13Q07878 PHO11YAR071W 1404 nt1.79□□□□□ -2.12
VPS13Q07878 SSD1YDR293C 3753 nt1.79□□□□□ -2.12
VPS13Q07878 SAK1YER129W 3429 nt1.78□□□□□ -2.12
VPS13Q07878 GCN1YGL195W 8019 nt1.78□□□□□ -2.12
VPS13Q07878 PEX10YDR265W 1014 nt1.78□□□□□ -2.12
VPS13Q07878 PDR17YNL264C 1053 nt1.78□□□□□ -2.12
VPS13Q07878 YAT2YER024W 2772 nt1.78□□□□□ -2.12
VPS13Q07878 SVL3YPL032C 2478 nt1.78□□□□□ -2.12
VPS13Q07878 PRP38YGR075C 729 nt1.78□□□□□ -2.12
VPS13Q07878 QCR9YGR183C 201 nt1.78□□□□□ -2.12
VPS13Q07878 HEM4YOR278W 828 nt1.78□□□□□ -2.12
VPS13Q07878 YOR392WYOR392W 444 nt1.78□□□□□ -2.12
VPS13Q07878 ISU1YPL135W 498 nt1.78□□□□□ -2.12
VPS13Q07878 YEF3YLR249W 3135 nt1.78□□□□□ -2.12
VPS13Q07878 RAD26YJR035W 3258 nt1.78□□□□□ -2.13
VPS13Q07878 YBP1YBR216C 2025 nt1.78□□□□□ -2.13
VPS13Q07878 TIF35YDR429C 825 nt1.77□□□□□ -2.13
VPS13Q07878 DAD2YKR083C 402 nt1.77□□□□□ -2.13
VPS13Q07878 ARL1YBR164C 552 nt1.77□□□□□ -2.13
VPS13Q07878 YHR177WYHR177W 1362 nt1.77□□□□□ -2.13
VPS13Q07878 MDM32YOR147W 1869 nt1.77□□□□□ -2.13
VPS13Q07878 YOR365CYOR365C 2112 nt1.77□□□□□ -2.13
VPS13Q07878 KHA1YJL094C 2622 nt1.77□□□□□ -2.13
VPS13Q07878 YLR278CYLR278C 4026 nt1.77□□□□□ -2.13
VPS13Q07878 PET100YDR079W 336 nt1.77□□□□□ -2.13
VPS13Q07878 YAL026C-AYAL026C-A 438 nt1.77□□□□□ -2.13
VPS13Q07878 YOR029WYOR029W 336 nt1.77□□□□□ -2.13
VPS13Q07878 UBP15YMR304W 3693 nt1.77□□□□□ -2.13
VPS13Q07878 SIP1YDR422C 2448 nt1.76□□□□□ -2.13
VPS13Q07878 GEA1YJR031C 4227 nt1.76□□□□□ -2.13
VPS13Q07878 ARP5YNL059C 2268 nt1.76□□□□□ -2.13
VPS13Q07878 ECM7YLR443W 1347 nt1.76□□□□□ -2.13
VPS13Q07878 tF(GAA)BtF(GAA)B 73 nt1.76□□□□□ -2.13
VPS13Q07878 tF(GAA)FtF(GAA)F 73 nt1.76□□□□□ -2.13
VPS13Q07878 tF(GAA)GtF(GAA)G 73 nt1.76□□□□□ -2.13
VPS13Q07878 tF(GAA)H1tF(GAA)H1 73 nt1.76□□□□□ -2.13
VPS13Q07878 tF(GAA)H2tF(GAA)H2 73 nt1.76□□□□□ -2.13
VPS13Q07878 tF(GAA)MtF(GAA)M 73 nt1.76□□□□□ -2.13
VPS13Q07878 tF(GAA)P1tF(GAA)P1 73 nt1.76□□□□□ -2.13
VPS13Q07878 tF(GAA)P2tF(GAA)P2 73 nt1.76□□□□□ -2.13
VPS13Q07878 HIT1YJR055W 495 nt1.76□□□□□ -2.13
VPS13Q07878 PSR1YLL010C 1284 nt1.76□□□□□ -2.13
VPS13Q07878 PRM7YDL039C 2097 nt1.76□□□□□ -2.13
VPS13Q07878 YIL082W-AYIL082W-A 4497 nt1.76□□□□□ -2.13
VPS13Q07878 RCE1YMR274C 948 nt1.75□□□□□ -2.13
VPS13Q07878 MPH1YIR002C 2982 nt1.75□□□□□ -2.13
VPS13Q07878 DNL4YOR005C 2835 nt1.75□□□□□ -2.13
VPS13Q07878 SNO3YFL060C 669 nt1.75□□□□□ -2.13
VPS13Q07878 YHR097CYHR097C 1101 nt1.75□□□□□ -2.13
VPS13Q07878 MST28YAR033W 705 nt1.75□□□□□ -2.13
VPS13Q07878 SNO2YNL334C 669 nt1.75□□□□□ -2.13
VPS13Q07878 RPC40YPR110C 1008 nt1.75□□□□□ -2.13
VPS13Q07878 YGR109W-BYGR109W-B 4644 nt1.75□□□□□ -2.13
VPS13Q07878 APP1YNL094W 1764 nt1.75□□□□□ -2.13
VPS13Q07878 CDC55YGL190C 1581 nt1.75□□□□□ -2.13
VPS13Q07878 ERT1YBR239C 1590 nt1.75□□□□□ -2.13
VPS13Q07878 RNR4YGR180C 1038 nt1.75□□□□□ -2.13
VPS13Q07878 BUD21YOR078W 645 nt1.75□□□□□ -2.13
VPS13Q07878 UTP5YDR398W 1932 nt1.75□□□□□ -2.13
VPS13Q07878 ETP1YHL010C 1758 nt1.74□□□□□ -2.13
VPS13Q07878 SNX41YDR425W 1878 nt1.74□□□□□ -2.13
VPS13Q07878 RTA1YGR213C 954 nt1.74□□□□□ -2.13
VPS13Q07878 MRPL9YGR220C 810 nt1.74□□□□□ -2.13
VPS13Q07878 YPR177CYPR177C 372 nt1.74□□□□□ -2.13
VPS13Q07878 PSK1YAL017W 4071 nt1.74□□□□□ -2.13
VPS13Q07878 HKR1YDR420W 5409 nt1.74□□□□□ -2.13
VPS13Q07878 MCM22YJR135C 720 nt1.74□□□□□ -2.13
VPS13Q07878 CAP1YKL007W 807 nt1.74□□□□□ -2.13
VPS13Q07878 SIL1YOL031C 1266 nt1.74□□□□□ -2.13
VPS13Q07878 YDR249CYDR249C 1122 nt1.73□□□□□ -2.13
VPS13Q07878 CPR5YDR304C 678 nt1.73□□□□□ -2.13
VPS13Q07878 BSD2YBR290W 966 nt1.73□□□□□ -2.13
VPS13Q07878 ALY1YKR021W 2748 nt1.73□□□□□ -2.13
VPS13Q07878 DBP7YKR024C 2229 nt1.73□□□□□ -2.13
VPS13Q07878 YER121WYER121W 345 nt1.73□□□□□ -2.13
VPS13Q07878 NNT1YLR285W 786 nt1.73□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 54.1 ms