Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL1Q00532 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.84■□□□□ 0.93
CDKL1Q00532 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.84■□□□□ 0.93
CDKL1Q00532 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL1Q00532 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL1Q00532 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL1Q00532 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL1Q00532 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.83■□□□□ 0.93
CDKL1Q00532 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL1Q00532 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL1Q00532 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL1Q00532 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL1Q00532 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.83■□□□□ 0.93
CDKL1Q00532 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL1Q00532 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL1Q00532 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.83■□□□□ 0.93
CDKL1Q00532 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL1Q00532 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL1Q00532 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.83■□□□□ 0.93
CDKL1Q00532 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDKL1Q00532 AC005229.4-201ENST00000610085 2198 ntBASIC20.83■□□□□ 0.92
CDKL1Q00532 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDKL1Q00532 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDKL1Q00532 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CDKL1Q00532 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL1Q00532 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.82■□□□□ 0.92
CDKL1Q00532 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL1Q00532 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.82■□□□□ 0.92
CDKL1Q00532 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL1Q00532 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.82■□□□□ 0.92
CDKL1Q00532 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL1Q00532 AC092667.1-201ENST00000434301 2586 ntBASIC20.82■□□□□ 0.92
CDKL1Q00532 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL1Q00532 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDKL1Q00532 MIR572-201ENST00000384983 95 ntBASIC20.82■□□□□ 0.92
CDKL1Q00532 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.82■□□□□ 0.92
CDKL1Q00532 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.82■□□□□ 0.92
CDKL1Q00532 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CDKL1Q00532 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.82■□□□□ 0.92
CDKL1Q00532 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.82■□□□□ 0.92
CDKL1Q00532 AP006587.3-201ENST00000525742 1516 ntBASIC20.82■□□□□ 0.92
CDKL1Q00532 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL1Q00532 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL1Q00532 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL1Q00532 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL1Q00532 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.81■□□□□ 0.92
CDKL1Q00532 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL1Q00532 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.81■□□□□ 0.92
CDKL1Q00532 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL1Q00532 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.81■□□□□ 0.92
CDKL1Q00532 AC105233.4-201ENST00000642045 216 ntBASIC20.81■□□□□ 0.92
CDKL1Q00532 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL1Q00532 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.81■□□□□ 0.92
CDKL1Q00532 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.81■□□□□ 0.92
CDKL1Q00532 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL1Q00532 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CDKL1Q00532 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.81■□□□□ 0.92
CDKL1Q00532 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CDKL1Q00532 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL1Q00532 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDKL1Q00532 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.8■□□□□ 0.92
CDKL1Q00532 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL1Q00532 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL1Q00532 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.8■□□□□ 0.92
CDKL1Q00532 AC009237.3-201ENST00000393279 1427 ntBASIC20.79■□□□□ 0.92
CDKL1Q00532 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKL1Q00532 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL1Q00532 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDKL1Q00532 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL1Q00532 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL1Q00532 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.79■□□□□ 0.92
CDKL1Q00532 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.79■□□□□ 0.92
CDKL1Q00532 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.79■□□□□ 0.92
CDKL1Q00532 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.79■□□□□ 0.92
CDKL1Q00532 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL1Q00532 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL1Q00532 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKL1Q00532 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL1Q00532 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL1Q00532 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL1Q00532 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL1Q00532 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL1Q00532 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKL1Q00532 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.78■□□□□ 0.92
CDKL1Q00532 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.78■□□□□ 0.92
CDKL1Q00532 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKL1Q00532 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL1Q00532 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKL1Q00532 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL1Q00532 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL1Q00532 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL1Q00532 AC003102.1-202ENST00000563394 1796 ntBASIC20.77■□□□□ 0.92
CDKL1Q00532 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL1Q00532 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CDKL1Q00532 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CDKL1Q00532 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.77■□□□□ 0.92
CDKL1Q00532 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL1Q00532 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL1Q00532 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDKL1Q00532 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms