Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
IRX4P78413 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.95■■□□□ 1.1
IRX4P78413 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IRX4P78413 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.95■■□□□ 1.1
IRX4P78413 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
IRX4P78413 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.95■■□□□ 1.1
IRX4P78413 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
IRX4P78413 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.95■■□□□ 1.1
IRX4P78413 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IRX4P78413 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IRX4P78413 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.94■■□□□ 1.1
IRX4P78413 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
IRX4P78413 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
IRX4P78413 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
IRX4P78413 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.94■■□□□ 1.1
IRX4P78413 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
IRX4P78413 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
IRX4P78413 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.94■■□□□ 1.1
IRX4P78413 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.94■■□□□ 1.1
IRX4P78413 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.94■■□□□ 1.1
IRX4P78413 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
IRX4P78413 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.94■■□□□ 1.1
IRX4P78413 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
IRX4P78413 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
IRX4P78413 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
IRX4P78413 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.94■■□□□ 1.1
IRX4P78413 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
IRX4P78413 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
IRX4P78413 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
IRX4P78413 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.93■■□□□ 1.1
IRX4P78413 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.93■■□□□ 1.1
IRX4P78413 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.93■■□□□ 1.1
IRX4P78413 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
IRX4P78413 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.93■■□□□ 1.1
IRX4P78413 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.93■■□□□ 1.1
IRX4P78413 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
IRX4P78413 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.93■■□□□ 1.1
IRX4P78413 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.93■■□□□ 1.1
IRX4P78413 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
IRX4P78413 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IRX4P78413 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.92■■□□□ 1.1
IRX4P78413 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IRX4P78413 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IRX4P78413 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
IRX4P78413 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IRX4P78413 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IRX4P78413 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
IRX4P78413 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
IRX4P78413 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IRX4P78413 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.92■■□□□ 1.1
IRX4P78413 FP325331.1-202ENST00000623531 1380 ntBASIC21.92■■□□□ 1.1
IRX4P78413 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IRX4P78413 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.92■■□□□ 1.1
IRX4P78413 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.92■■□□□ 1.1
IRX4P78413 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.92■■□□□ 1.1
IRX4P78413 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.92■■□□□ 1.1
IRX4P78413 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IRX4P78413 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IRX4P78413 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.91■■□□□ 1.1
IRX4P78413 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
IRX4P78413 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IRX4P78413 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IRX4P78413 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
IRX4P78413 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IRX4P78413 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.91■■□□□ 1.1
IRX4P78413 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.91■■□□□ 1.1
IRX4P78413 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.91■■□□□ 1.1
IRX4P78413 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.91■■□□□ 1.1
IRX4P78413 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IRX4P78413 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IRX4P78413 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.91■■□□□ 1.1
IRX4P78413 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
IRX4P78413 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
IRX4P78413 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IRX4P78413 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.9■■□□□ 1.1
IRX4P78413 AP004607.4-201ENST00000530158 1459 ntBASIC21.9■■□□□ 1.1
IRX4P78413 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.9■■□□□ 1.1
IRX4P78413 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IRX4P78413 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IRX4P78413 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.9■■□□□ 1.1
IRX4P78413 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IRX4P78413 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IRX4P78413 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.9■■□□□ 1.1
IRX4P78413 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
IRX4P78413 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
IRX4P78413 AL355802.2-201ENST00000402069 882 ntBASIC21.9■■□□□ 1.1
IRX4P78413 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.9■■□□□ 1.1
IRX4P78413 DUX4L4-201ENST00000566884 1269 ntBASIC21.9■■□□□ 1.1
IRX4P78413 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
IRX4P78413 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
IRX4P78413 BID-214ENST00000617586 542 ntTSL 5 BASIC21.9■■□□□ 1.1
IRX4P78413 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IRX4P78413 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.9■■□□□ 1.1
IRX4P78413 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
IRX4P78413 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.9■■□□□ 1.1
IRX4P78413 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IRX4P78413 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.9■■□□□ 1.1
IRX4P78413 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
IRX4P78413 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.9■■□□□ 1.1
IRX4P78413 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms