Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.99■□□□□ 0.79
RAB38P57729 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB38P57729 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB38P57729 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB38P57729 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB38P57729 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB38P57729 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB38P57729 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB38P57729 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB38P57729 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB38P57729 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
RAB38P57729 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB38P57729 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB38P57729 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB38P57729 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB38P57729 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB38P57729 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB38P57729 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
RAB38P57729 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.98■□□□□ 0.79
RAB38P57729 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB38P57729 KRT18P5-201ENST00000436075 1291 ntBASIC19.98■□□□□ 0.79
RAB38P57729 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB38P57729 AL162430.1-201ENST00000480705 870 ntBASIC19.98■□□□□ 0.79
RAB38P57729 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.98■□□□□ 0.79
RAB38P57729 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB38P57729 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB38P57729 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RAB38P57729 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
RAB38P57729 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB38P57729 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RAB38P57729 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB38P57729 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
RAB38P57729 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB38P57729 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB38P57729 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB38P57729 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.97■□□□□ 0.79
RAB38P57729 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB38P57729 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB38P57729 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB38P57729 AC104187.1-201ENST00000607510 612 ntBASIC19.97■□□□□ 0.79
RAB38P57729 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB38P57729 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB38P57729 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB38P57729 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB38P57729 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB38P57729 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB38P57729 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB38P57729 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB38P57729 FBXW4P1-201ENST00000426721 2239 ntBASIC19.96■□□□□ 0.79
RAB38P57729 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB38P57729 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB38P57729 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB38P57729 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB38P57729 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB38P57729 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RAB38P57729 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB38P57729 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB38P57729 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB38P57729 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB38P57729 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB38P57729 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB38P57729 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB38P57729 KRT18P61-201ENST00000585825 1298 ntBASIC19.96■□□□□ 0.79
RAB38P57729 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RAB38P57729 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB38P57729 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB38P57729 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB38P57729 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RAB38P57729 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB38P57729 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RAB38P57729 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
RAB38P57729 KRT19P1-201ENST00000405746 1186 ntBASIC19.95■□□□□ 0.78
RAB38P57729 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB38P57729 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB38P57729 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.95■□□□□ 0.78
RAB38P57729 AC138907.5-202ENST00000569484 235 ntBASIC19.95■□□□□ 0.78
RAB38P57729 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RAB38P57729 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB38P57729 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB38P57729 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB38P57729 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB38P57729 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.95■□□□□ 0.78
RAB38P57729 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB38P57729 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB38P57729 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB38P57729 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB38P57729 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.94■□□□□ 0.78
RAB38P57729 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RAB38P57729 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.94■□□□□ 0.78
RAB38P57729 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB38P57729 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.94■□□□□ 0.78
RAB38P57729 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB38P57729 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB38P57729 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB38P57729 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB38P57729 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB38P57729 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB38P57729 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB38P57729 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB38P57729 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms