Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLNS1AP54105 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.99■□□□□ 0.95
CLNS1AP54105 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLNS1AP54105 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.99■□□□□ 0.95
CLNS1AP54105 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CLNS1AP54105 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CLNS1AP54105 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CLNS1AP54105 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CLNS1AP54105 KRT125P-201ENST00000546827 989 ntBASIC20.98■□□□□ 0.95
CLNS1AP54105 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.98■□□□□ 0.95
CLNS1AP54105 AC092028.1-203ENST00000608262 953 ntBASIC20.98■□□□□ 0.95
CLNS1AP54105 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.98■□□□□ 0.95
CLNS1AP54105 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLNS1AP54105 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLNS1AP54105 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.98■□□□□ 0.95
CLNS1AP54105 LINC01960-201ENST00000563759 1884 ntBASIC20.98■□□□□ 0.95
CLNS1AP54105 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CLNS1AP54105 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLNS1AP54105 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLNS1AP54105 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.98■□□□□ 0.95
CLNS1AP54105 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLNS1AP54105 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLNS1AP54105 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.97■□□□□ 0.95
CLNS1AP54105 AC026471.1-201ENST00000564629 3026 ntBASIC20.97■□□□□ 0.95
CLNS1AP54105 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLNS1AP54105 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLNS1AP54105 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLNS1AP54105 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLNS1AP54105 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CLNS1AP54105 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLNS1AP54105 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CLNS1AP54105 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLNS1AP54105 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLNS1AP54105 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLNS1AP54105 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLNS1AP54105 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLNS1AP54105 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
CLNS1AP54105 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLNS1AP54105 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLNS1AP54105 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.96■□□□□ 0.95
CLNS1AP54105 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.96■□□□□ 0.95
CLNS1AP54105 Z92544.1-202ENST00000571933 1220 ntBASIC20.96■□□□□ 0.95
CLNS1AP54105 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CLNS1AP54105 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLNS1AP54105 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLNS1AP54105 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLNS1AP54105 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLNS1AP54105 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLNS1AP54105 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLNS1AP54105 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLNS1AP54105 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.96■□□□□ 0.95
CLNS1AP54105 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLNS1AP54105 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLNS1AP54105 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLNS1AP54105 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLNS1AP54105 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.95■□□□□ 0.94
CLNS1AP54105 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLNS1AP54105 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.95■□□□□ 0.94
CLNS1AP54105 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLNS1AP54105 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLNS1AP54105 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CLNS1AP54105 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLNS1AP54105 MTDHP2-201ENST00000601468 714 ntBASIC20.95■□□□□ 0.94
CLNS1AP54105 LINC01006-201ENST00000333319 2292 ntBASIC20.95■□□□□ 0.94
CLNS1AP54105 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLNS1AP54105 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLNS1AP54105 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CLNS1AP54105 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLNS1AP54105 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLNS1AP54105 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLNS1AP54105 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLNS1AP54105 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLNS1AP54105 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CLNS1AP54105 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLNS1AP54105 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
CLNS1AP54105 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CLNS1AP54105 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.94■□□□□ 0.94
CLNS1AP54105 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.94■□□□□ 0.94
CLNS1AP54105 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLNS1AP54105 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.94■□□□□ 0.94
CLNS1AP54105 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLNS1AP54105 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLNS1AP54105 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLNS1AP54105 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.94■□□□□ 0.94
CLNS1AP54105 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CLNS1AP54105 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.94■□□□□ 0.94
CLNS1AP54105 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLNS1AP54105 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CLNS1AP54105 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CLNS1AP54105 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CLNS1AP54105 AC138932.1-201ENST00000534164 6830 ntBASIC20.93■□□□□ 0.94
CLNS1AP54105 AC009102.2-201ENST00000606772 1639 ntBASIC20.93■□□□□ 0.94
CLNS1AP54105 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CLNS1AP54105 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLNS1AP54105 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.93■□□□□ 0.94
CLNS1AP54105 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CLNS1AP54105 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLNS1AP54105 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CLNS1AP54105 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLNS1AP54105 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms