Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.33■■□□□ 1.01
NUBP1P53384 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.33■■□□□ 1.01
NUBP1P53384 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.33■■□□□ 1.01
NUBP1P53384 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.33■■□□□ 1.01
NUBP1P53384 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.33■■□□□ 1.01
NUBP1P53384 AC069544.1-201ENST00000609399 999 ntBASIC21.33■■□□□ 1.01
NUBP1P53384 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.33■■□□□ 1
NUBP1P53384 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NUBP1P53384 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
NUBP1P53384 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
NUBP1P53384 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.32■■□□□ 1
NUBP1P53384 ARMC10P1-201ENST00000313754 855 ntBASIC21.32■■□□□ 1
NUBP1P53384 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.32■■□□□ 1
NUBP1P53384 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.32■■□□□ 1
NUBP1P53384 KRT18P35-201ENST00000510488 1269 ntBASIC21.32■■□□□ 1
NUBP1P53384 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.32■■□□□ 1
NUBP1P53384 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
NUBP1P53384 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.32■■□□□ 1
NUBP1P53384 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NUBP1P53384 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
NUBP1P53384 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.32■■□□□ 1
NUBP1P53384 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NUBP1P53384 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NUBP1P53384 AP004607.7-201ENST00000527152 1677 ntBASIC21.31■■□□□ 1
NUBP1P53384 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.31■■□□□ 1
NUBP1P53384 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
NUBP1P53384 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NUBP1P53384 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NUBP1P53384 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.31■■□□□ 1
NUBP1P53384 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.31■■□□□ 1
NUBP1P53384 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.31■■□□□ 1
NUBP1P53384 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.31■■□□□ 1
NUBP1P53384 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.31■■□□□ 1
NUBP1P53384 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.31■■□□□ 1
NUBP1P53384 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.31■■□□□ 1
NUBP1P53384 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.31■■□□□ 1
NUBP1P53384 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.31■■□□□ 1
NUBP1P53384 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
NUBP1P53384 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
NUBP1P53384 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NUBP1P53384 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NUBP1P53384 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.3■■□□□ 1
NUBP1P53384 AL353803.4-201ENST00000565882 1934 ntBASIC21.3■■□□□ 1
NUBP1P53384 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NUBP1P53384 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.3■■□□□ 1
NUBP1P53384 TMPOP1-202ENST00000424642 1267 ntBASIC21.3■■□□□ 1
NUBP1P53384 AC079089.2-201ENST00000531211 1277 ntBASIC21.3■■□□□ 1
NUBP1P53384 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.3■■□□□ 1
NUBP1P53384 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.3■■□□□ 1
NUBP1P53384 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NUBP1P53384 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.29■■□□□ 1
NUBP1P53384 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
NUBP1P53384 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.29■■□□□ 1
NUBP1P53384 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NUBP1P53384 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NUBP1P53384 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.29■■□□□ 1
NUBP1P53384 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NUBP1P53384 TSPY7P-201ENST00000431358 1114 ntBASIC21.29■■□□□ 1
NUBP1P53384 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
NUBP1P53384 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.29■■□□□ 1
NUBP1P53384 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
NUBP1P53384 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NUBP1P53384 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.29■■□□□ 1
NUBP1P53384 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.29■■□□□ 1
NUBP1P53384 AL049637.2-201ENST00000641778 930 ntBASIC21.29■■□□□ 1
NUBP1P53384 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NUBP1P53384 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
NUBP1P53384 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.29■■□□□ 1
NUBP1P53384 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.28■■□□□ 1
NUBP1P53384 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
NUBP1P53384 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NUBP1P53384 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NUBP1P53384 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.28■■□□□ 1
NUBP1P53384 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.28■■□□□ 1
NUBP1P53384 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.28■■□□□ 1
NUBP1P53384 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.28■■□□□ 1
NUBP1P53384 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
NUBP1P53384 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
NUBP1P53384 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.28■■□□□ 1
NUBP1P53384 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.28■■□□□ 1
NUBP1P53384 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.28■■□□□ 1
NUBP1P53384 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NUBP1P53384 AC092368.3-202ENST00000574180 1591 ntBASIC21.27■■□□□ 1
NUBP1P53384 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.27■■□□□ 1
NUBP1P53384 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.27■■□□□ 1
NUBP1P53384 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
NUBP1P53384 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC21.27■■□□□ 1
NUBP1P53384 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.27■■□□□ 1
NUBP1P53384 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.27■■□□□ 1
NUBP1P53384 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NUBP1P53384 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.27■■□□□ 1
NUBP1P53384 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.27■■□□□ 1
NUBP1P53384 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.27■□□□□ 0.99
NUBP1P53384 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
NUBP1P53384 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NUBP1P53384 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.26■□□□□ 0.99
NUBP1P53384 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.26■□□□□ 0.99
NUBP1P53384 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NUBP1P53384 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC21.26■□□□□ 0.99
NUBP1P53384 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms