Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC25A1P53007 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC25A1P53007 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SLC25A1P53007 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC25A1P53007 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC25A1P53007 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SLC25A1P53007 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC25A1P53007 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC25A1P53007 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC25A1P53007 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC25A1P53007 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC25A1P53007 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC25A1P53007 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC25A1P53007 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC25A1P53007 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC25A1P53007 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC25A1P53007 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC25A1P53007 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC25A1P53007 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC25A1P53007 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC25A1P53007 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC25A1P53007 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC25A1P53007 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC25A1P53007 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.83■□□□□ 0.6
SLC25A1P53007 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC25A1P53007 AC233992.3-201ENST00000607491 485 ntBASIC18.83■□□□□ 0.6
SLC25A1P53007 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC25A1P53007 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC25A1P53007 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC25A1P53007 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SLC25A1P53007 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SLC25A1P53007 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC25A1P53007 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC25A1P53007 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC25A1P53007 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC25A1P53007 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC25A1P53007 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC25A1P53007 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC25A1P53007 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.82■□□□□ 0.6
SLC25A1P53007 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC25A1P53007 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC25A1P53007 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC25A1P53007 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLC25A1P53007 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC25A1P53007 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC25A1P53007 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC25A1P53007 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 UNC93B3-201ENST00000308076 687 ntBASIC18.81■□□□□ 0.6
SLC25A1P53007 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.81■□□□□ 0.6
SLC25A1P53007 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
SLC25A1P53007 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC25A1P53007 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC25A1P53007 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SLC25A1P53007 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC25A1P53007 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A1P53007 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SLC25A1P53007 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC25A1P53007 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC25A1P53007 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC25A1P53007 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC25A1P53007 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC25A1P53007 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
SLC25A1P53007 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC25A1P53007 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC25A1P53007 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SLC25A1P53007 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC25A1P53007 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC25A1P53007 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC25A1P53007 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC25A1P53007 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC25A1P53007 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC25A1P53007 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC25A1P53007 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SLC25A1P53007 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC25A1P53007 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SLC25A1P53007 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A1P53007 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A1P53007 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SLC25A1P53007 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC25A1P53007 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A1P53007 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC25A1P53007 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC25A1P53007 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A1P53007 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLC25A1P53007 IGHV3-19-201ENST00000521488 291 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms