Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CLCNKAP51800 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
CLCNKAP51800 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CLCNKAP51800 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.82■□□□□ 0.92
CLCNKAP51800 KRT18P20-201ENST00000548986 1279 ntBASIC20.82■□□□□ 0.92
CLCNKAP51800 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.82■□□□□ 0.92
CLCNKAP51800 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.82■□□□□ 0.92
CLCNKAP51800 RARRES2P11-201ENST00000635158 484 ntBASIC20.82■□□□□ 0.92
CLCNKAP51800 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CLCNKAP51800 AC026471.6-201ENST00000622954 1905 ntBASIC20.82■□□□□ 0.92
CLCNKAP51800 AL117328.2-201ENST00000624617 1940 ntBASIC20.82■□□□□ 0.92
CLCNKAP51800 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCNKAP51800 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCNKAP51800 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.81■□□□□ 0.92
CLCNKAP51800 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCNKAP51800 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCNKAP51800 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.81■□□□□ 0.92
CLCNKAP51800 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCNKAP51800 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCNKAP51800 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCNKAP51800 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.81■□□□□ 0.92
CLCNKAP51800 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCNKAP51800 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCNKAP51800 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCNKAP51800 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCNKAP51800 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCNKAP51800 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCNKAP51800 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCNKAP51800 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.8■□□□□ 0.92
CLCNKAP51800 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.8■□□□□ 0.92
CLCNKAP51800 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.8■□□□□ 0.92
CLCNKAP51800 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.8■□□□□ 0.92
CLCNKAP51800 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.8■□□□□ 0.92
CLCNKAP51800 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCNKAP51800 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.8■□□□□ 0.92
CLCNKAP51800 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCNKAP51800 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCNKAP51800 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCNKAP51800 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCNKAP51800 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCNKAP51800 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCNKAP51800 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLCNKAP51800 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.8■□□□□ 0.92
CLCNKAP51800 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCNKAP51800 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.79■□□□□ 0.92
CLCNKAP51800 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCNKAP51800 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCNKAP51800 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLCNKAP51800 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCNKAP51800 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCNKAP51800 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLCNKAP51800 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.79■□□□□ 0.92
CLCNKAP51800 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.79■□□□□ 0.92
CLCNKAP51800 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.79■□□□□ 0.92
CLCNKAP51800 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.79■□□□□ 0.92
CLCNKAP51800 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLCNKAP51800 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.79■□□□□ 0.92
CLCNKAP51800 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCNKAP51800 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCNKAP51800 AC003102.1-202ENST00000563394 1796 ntBASIC20.79■□□□□ 0.92
CLCNKAP51800 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLCNKAP51800 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCNKAP51800 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCNKAP51800 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCNKAP51800 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCNKAP51800 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCNKAP51800 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCNKAP51800 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCNKAP51800 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCNKAP51800 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCNKAP51800 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCNKAP51800 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.78■□□□□ 0.92
CLCNKAP51800 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCNKAP51800 BID-214ENST00000617586 542 ntTSL 5 BASIC20.78■□□□□ 0.92
CLCNKAP51800 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.78■□□□□ 0.92
CLCNKAP51800 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CLCNKAP51800 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCNKAP51800 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCNKAP51800 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCNKAP51800 AC079834.2-201ENST00000609776 1949 ntBASIC20.77■□□□□ 0.92
CLCNKAP51800 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
CLCNKAP51800 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCNKAP51800 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCNKAP51800 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCNKAP51800 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.77■□□□□ 0.92
CLCNKAP51800 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CLCNKAP51800 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms