Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1EP49674 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1EP49674 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1EP49674 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1EP49674 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1EP49674 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1EP49674 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1EP49674 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1EP49674 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1EP49674 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1EP49674 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1EP49674 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1EP49674 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1EP49674 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.87■□□□□ 0.93
CSNK1EP49674 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CSNK1EP49674 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1EP49674 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.87■□□□□ 0.93
CSNK1EP49674 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.87■□□□□ 0.93
CSNK1EP49674 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CSNK1EP49674 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
CSNK1EP49674 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.87■□□□□ 0.93
CSNK1EP49674 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1EP49674 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1EP49674 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1EP49674 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.87■□□□□ 0.93
CSNK1EP49674 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1EP49674 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1EP49674 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.86■□□□□ 0.93
CSNK1EP49674 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1EP49674 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1EP49674 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CSNK1EP49674 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CSNK1EP49674 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1EP49674 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
CSNK1EP49674 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1EP49674 PRORSD1P-201ENST00000295112 541 ntBASIC20.86■□□□□ 0.93
CSNK1EP49674 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1EP49674 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.86■□□□□ 0.93
CSNK1EP49674 AC097658.1-201ENST00000475555 843 ntBASIC20.86■□□□□ 0.93
CSNK1EP49674 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.86■□□□□ 0.93
CSNK1EP49674 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CSNK1EP49674 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.86■□□□□ 0.93
CSNK1EP49674 AC083880.1-201ENST00000608266 535 ntBASIC20.86■□□□□ 0.93
CSNK1EP49674 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1EP49674 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CSNK1EP49674 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.86■□□□□ 0.93
CSNK1EP49674 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1EP49674 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1EP49674 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
CSNK1EP49674 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.85■□□□□ 0.93
CSNK1EP49674 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK1EP49674 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.85■□□□□ 0.93
CSNK1EP49674 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1EP49674 AL591742.1-201ENST00000604433 565 ntBASIC20.85■□□□□ 0.93
CSNK1EP49674 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.85■□□□□ 0.93
CSNK1EP49674 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK1EP49674 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1EP49674 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1EP49674 RBM17P2-201ENST00000616397 1405 ntBASIC20.85■□□□□ 0.93
CSNK1EP49674 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CSNK1EP49674 AC139530.1-201ENST00000575312 1977 ntBASIC20.85■□□□□ 0.93
CSNK1EP49674 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CSNK1EP49674 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1EP49674 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.84■□□□□ 0.93
CSNK1EP49674 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CSNK1EP49674 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1EP49674 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1EP49674 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CSNK1EP49674 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1EP49674 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.84■□□□□ 0.93
CSNK1EP49674 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.84■□□□□ 0.93
CSNK1EP49674 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.84■□□□□ 0.93
CSNK1EP49674 RARRES2P4-201ENST00000514074 484 ntBASIC20.84■□□□□ 0.93
CSNK1EP49674 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1EP49674 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.84■□□□□ 0.93
CSNK1EP49674 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CSNK1EP49674 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.84■□□□□ 0.93
CSNK1EP49674 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.84■□□□□ 0.93
CSNK1EP49674 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CSNK1EP49674 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CSNK1EP49674 KRT16P2-201ENST00000414673 1423 ntBASIC20.84■□□□□ 0.93
CSNK1EP49674 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1EP49674 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1EP49674 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1EP49674 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.83■□□□□ 0.93
CSNK1EP49674 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1EP49674 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1EP49674 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1EP49674 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.83■□□□□ 0.93
CSNK1EP49674 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CSNK1EP49674 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1EP49674 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.83■□□□□ 0.93
CSNK1EP49674 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.83■□□□□ 0.93
CSNK1EP49674 MYC-209ENST00000641252 345 ntBASIC20.83■□□□□ 0.93
CSNK1EP49674 AC010980.2-201ENST00000587099 1412 ntBASIC20.83■□□□□ 0.93
CSNK1EP49674 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.83■□□□□ 0.92
CSNK1EP49674 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSNK1EP49674 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CSNK1EP49674 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1EP49674 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms