Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN2CP42773 AP006587.3-201ENST00000525742 1516 ntBASIC20.03■□□□□ 0.8
CDKN2CP42773 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN2CP42773 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN2CP42773 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN2CP42773 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.03■□□□□ 0.8
CDKN2CP42773 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.03■□□□□ 0.8
CDKN2CP42773 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN2CP42773 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.03■□□□□ 0.8
CDKN2CP42773 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN2CP42773 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN2CP42773 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN2CP42773 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN2CP42773 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2CP42773 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2CP42773 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CDKN2CP42773 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2CP42773 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2CP42773 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.02■□□□□ 0.8
CDKN2CP42773 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2CP42773 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2CP42773 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2CP42773 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2CP42773 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.02■□□□□ 0.8
CDKN2CP42773 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2CP42773 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CDKN2CP42773 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2CP42773 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2CP42773 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.02■□□□□ 0.8
CDKN2CP42773 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.02■□□□□ 0.8
CDKN2CP42773 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.02■□□□□ 0.8
CDKN2CP42773 AL049796.1-201ENST00000565336 1766 ntBASIC20.02■□□□□ 0.8
CDKN2CP42773 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDKN2CP42773 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.02■□□□□ 0.8
CDKN2CP42773 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.02■□□□□ 0.79
CDKN2CP42773 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDKN2CP42773 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDKN2CP42773 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDKN2CP42773 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDKN2CP42773 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.01■□□□□ 0.79
CDKN2CP42773 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
CDKN2CP42773 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.01■□□□□ 0.79
CDKN2CP42773 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.01■□□□□ 0.79
CDKN2CP42773 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.01■□□□□ 0.79
CDKN2CP42773 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDKN2CP42773 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKN2CP42773 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.01■□□□□ 0.79
CDKN2CP42773 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKN2CP42773 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CDKN2CP42773 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKN2CP42773 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.01■□□□□ 0.79
CDKN2CP42773 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKN2CP42773 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20■□□□□ 0.79
CDKN2CP42773 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20■□□□□ 0.79
CDKN2CP42773 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKN2CP42773 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKN2CP42773 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKN2CP42773 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKN2CP42773 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKN2CP42773 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKN2CP42773 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKN2CP42773 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20■□□□□ 0.79
CDKN2CP42773 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDKN2CP42773 AL136116.3-201ENST00000402907 1138 ntBASIC20■□□□□ 0.79
CDKN2CP42773 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDKN2CP42773 SMUG1P1-201ENST00000590640 811 ntBASIC20■□□□□ 0.79
CDKN2CP42773 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20■□□□□ 0.79
CDKN2CP42773 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDKN2CP42773 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKN2CP42773 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDKN2CP42773 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKN2CP42773 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20■□□□□ 0.79
CDKN2CP42773 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.99■□□□□ 0.79
CDKN2CP42773 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKN2CP42773 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKN2CP42773 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDKN2CP42773 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKN2CP42773 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.99■□□□□ 0.79
CDKN2CP42773 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKN2CP42773 MIR4767-201ENST00000582827 78 ntBASIC19.99■□□□□ 0.79
CDKN2CP42773 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CDKN2CP42773 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CDKN2CP42773 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKN2CP42773 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKN2CP42773 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDKN2CP42773 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKN2CP42773 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CDKN2CP42773 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKN2CP42773 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKN2CP42773 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDKN2CP42773 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKN2CP42773 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.98■□□□□ 0.79
CDKN2CP42773 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDKN2CP42773 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.98■□□□□ 0.79
CDKN2CP42773 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKN2CP42773 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKN2CP42773 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.98■□□□□ 0.79
CDKN2CP42773 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKN2CP42773 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKN2CP42773 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms