Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CEACAM3P40198 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CEACAM3P40198 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CEACAM3P40198 AC097381.1-201ENST00000429019 1296 ntBASIC17.27■□□□□ 0.36
CEACAM3P40198 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.27■□□□□ 0.36
CEACAM3P40198 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CEACAM3P40198 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.27■□□□□ 0.36
CEACAM3P40198 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CEACAM3P40198 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.27■□□□□ 0.36
CEACAM3P40198 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.27■□□□□ 0.35
CEACAM3P40198 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CEACAM3P40198 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.27■□□□□ 0.35
CEACAM3P40198 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CEACAM3P40198 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.27■□□□□ 0.35
CEACAM3P40198 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEACAM3P40198 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEACAM3P40198 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEACAM3P40198 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.26■□□□□ 0.35
CEACAM3P40198 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEACAM3P40198 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEACAM3P40198 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CEACAM3P40198 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEACAM3P40198 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CEACAM3P40198 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.26■□□□□ 0.35
CEACAM3P40198 MIR6821-201ENST00000617625 74 ntBASIC17.26■□□□□ 0.35
CEACAM3P40198 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CEACAM3P40198 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.26■□□□□ 0.35
CEACAM3P40198 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.25■□□□□ 0.35
CEACAM3P40198 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEACAM3P40198 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CEACAM3P40198 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEACAM3P40198 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEACAM3P40198 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CEACAM3P40198 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CEACAM3P40198 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.25■□□□□ 0.35
CEACAM3P40198 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEACAM3P40198 KRT18P14-201ENST00000534205 1250 ntBASIC17.25■□□□□ 0.35
CEACAM3P40198 TERF1P2-201ENST00000583350 1212 ntBASIC17.25■□□□□ 0.35
CEACAM3P40198 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEACAM3P40198 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CEACAM3P40198 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEACAM3P40198 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.25■□□□□ 0.35
CEACAM3P40198 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEACAM3P40198 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CEACAM3P40198 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEACAM3P40198 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CEACAM3P40198 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.25■□□□□ 0.35
CEACAM3P40198 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CEACAM3P40198 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CEACAM3P40198 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CEACAM3P40198 AC034268.1-201ENST00000441047 882 ntBASIC17.24■□□□□ 0.35
CEACAM3P40198 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.24■□□□□ 0.35
CEACAM3P40198 RARRES2P6-201ENST00000567333 442 ntBASIC17.24■□□□□ 0.35
CEACAM3P40198 CCDC92B-201ENST00000575506 885 ntBASIC17.24■□□□□ 0.35
CEACAM3P40198 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.24■□□□□ 0.35
CEACAM3P40198 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.24■□□□□ 0.35
CEACAM3P40198 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CEACAM3P40198 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.24■□□□□ 0.35
CEACAM3P40198 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CEACAM3P40198 KRT87P-202ENST00000534226 1464 ntBASIC17.24■□□□□ 0.35
CEACAM3P40198 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CEACAM3P40198 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CEACAM3P40198 EP400NL-214ENST00000641289 2402 ntBASIC17.23■□□□□ 0.35
CEACAM3P40198 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.23■□□□□ 0.35
CEACAM3P40198 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.23■□□□□ 0.35
CEACAM3P40198 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEACAM3P40198 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CEACAM3P40198 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CEACAM3P40198 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.23■□□□□ 0.35
CEACAM3P40198 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CEACAM3P40198 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.23■□□□□ 0.35
CEACAM3P40198 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEACAM3P40198 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEACAM3P40198 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEACAM3P40198 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEACAM3P40198 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.23■□□□□ 0.35
CEACAM3P40198 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEACAM3P40198 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEACAM3P40198 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEACAM3P40198 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CEACAM3P40198 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEACAM3P40198 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CEACAM3P40198 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CEACAM3P40198 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CEACAM3P40198 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CEACAM3P40198 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CEACAM3P40198 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEACAM3P40198 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CEACAM3P40198 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEACAM3P40198 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CEACAM3P40198 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CEACAM3P40198 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CEACAM3P40198 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEACAM3P40198 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.22■□□□□ 0.35
CEACAM3P40198 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.22■□□□□ 0.35
CEACAM3P40198 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.22■□□□□ 0.35
CEACAM3P40198 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.22■□□□□ 0.35
CEACAM3P40198 MIR5787-201ENST00000611784 55 ntBASIC17.22■□□□□ 0.35
CEACAM3P40198 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
CEACAM3P40198 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms