Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 CAT5YOR125C 702 nt2.94□□□□□ -1.94
TDA11P38854 YOR238WYOR238W 912 nt2.94□□□□□ -1.94
TDA11P38854 SPP381YBR152W 876 nt2.94□□□□□ -1.94
TDA11P38854 VBA4YDR119W 2307 nt2.94□□□□□ -1.94
TDA11P38854 CIN1YOR349W 3045 nt2.94□□□□□ -1.94
TDA11P38854 IOC3YFR013W 2364 nt2.94□□□□□ -1.94
TDA11P38854 RIF1YBR275C 5751 nt2.94□□□□□ -1.94
TDA11P38854 KAR5YMR065W 1515 nt2.93□□□□□ -1.94
TDA11P38854 PIN4YBL051C 2007 nt2.93□□□□□ -1.94
TDA11P38854 SEC15YGL233W 2733 nt2.93□□□□□ -1.94
TDA11P38854 RIM1YCR028C-A 408 nt2.93□□□□□ -1.94
TDA11P38854 GRX2YDR513W 432 nt2.93□□□□□ -1.94
TDA11P38854 THO1YER063W 657 nt2.93□□□□□ -1.94
TDA11P38854 tQ(UUG)BtQ(UUG)B 72 nt2.93□□□□□ -1.94
TDA11P38854 YHR086W-AYHR086W-A 162 nt2.93□□□□□ -1.94
TDA11P38854 VMA5YKL080W 1179 nt2.93□□□□□ -1.94
TDA11P38854 YKL162CYKL162C 1209 nt2.93□□□□□ -1.94
TDA11P38854 YSF3YNL138W-A 258 nt2.93□□□□□ -1.94
TDA11P38854 RSM19YNR037C 276 nt2.93□□□□□ -1.94
TDA11P38854 YOR385WYOR385W 873 nt2.93□□□□□ -1.94
TDA11P38854 ECM29YHL030W 5607 nt2.93□□□□□ -1.94
TDA11P38854 PBS2YJL128C 2007 nt2.93□□□□□ -1.94
TDA11P38854 YHR202WYHR202W 1809 nt2.93□□□□□ -1.94
TDA11P38854 FLO11YIR019C 4104 nt2.92□□□□□ -1.94
TDA11P38854 MAK21YDR060W 3078 nt2.92□□□□□ -1.94
TDA11P38854 SAP1YER047C 2694 nt2.92□□□□□ -1.94
TDA11P38854 TSC13YDL015C 933 nt2.92□□□□□ -1.94
TDA11P38854 RRP42YDL111C 798 nt2.92□□□□□ -1.94
TDA11P38854 CGR1YGL029W 363 nt2.92□□□□□ -1.94
TDA11P38854 COX23YHR116W 456 nt2.92□□□□□ -1.94
TDA11P38854 CPR7YJR032W 1182 nt2.92□□□□□ -1.94
TDA11P38854 RSM26YJR101W 801 nt2.92□□□□□ -1.94
TDA11P38854 RNH203YLR154C 333 nt2.92□□□□□ -1.94
TDA11P38854 POP8YBL018C 402 nt2.92□□□□□ -1.94
TDA11P38854 MRPL16YBL038W 699 nt2.92□□□□□ -1.94
TDA11P38854 SSN8YNL025C 972 nt2.92□□□□□ -1.94
TDA11P38854 SYC1YOR179C 567 nt2.92□□□□□ -1.94
TDA11P38854 ATG5YPL149W 885 nt2.92□□□□□ -1.94
TDA11P38854 DYN1YKR054C 12279 nt2.92□□□□□ -1.94
TDA11P38854 CHS3YBR023C 3498 nt2.92□□□□□ -1.94
TDA11P38854 JIP5YPR169W 1479 nt2.91□□□□□ -1.94
TDA11P38854 EBS1YDR206W 2655 nt2.91□□□□□ -1.94
TDA11P38854 NHP10YDL002C 612 nt2.91□□□□□ -1.94
TDA11P38854 RNH202YDR279W 1053 nt2.91□□□□□ -1.94
TDA11P38854 SMT3YDR510W 306 nt2.91□□□□□ -1.94
TDA11P38854 YGL006W-AYGL006W-A 111 nt2.91□□□□□ -1.94
TDA11P38854 YHR097CYHR097C 1101 nt2.91□□□□□ -1.94
TDA11P38854 PCL7YIL050W 858 nt2.91□□□□□ -1.94
TDA11P38854 YIR023C-AYIR023C-A 324 nt2.91□□□□□ -1.94
TDA11P38854 PSY3YLR376C 729 nt2.91□□□□□ -1.94
TDA11P38854 YPR053CYPR053C 456 nt2.91□□□□□ -1.94
TDA11P38854 LDH1YBR204C 1128 nt2.91□□□□□ -1.94
TDA11P38854 AIM6YDL237W 1173 nt2.9□□□□□ -1.95
TDA11P38854 SWD2YKL018W 990 nt2.9□□□□□ -1.95
TDA11P38854 AAH1YNL141W 1044 nt2.9□□□□□ -1.95
TDA11P38854 YOR114WYOR114W 885 nt2.9□□□□□ -1.95
TDA11P38854 SAS5YOR213C 747 nt2.9□□□□□ -1.95
TDA11P38854 NIP7YPL211W 546 nt2.9□□□□□ -1.95
TDA11P38854 YML096WYML096W 1578 nt2.9□□□□□ -1.95
TDA11P38854 SIN3YOL004W 4611 nt2.9□□□□□ -1.95
TDA11P38854 BCH1YMR237W 2175 nt2.9□□□□□ -1.95
TDA11P38854 FLO1YAR050W 4614 nt2.89□□□□□ -1.95
TDA11P38854 NSA1YGL111W 1392 nt2.89□□□□□ -1.95
TDA11P38854 ITT1YML068W 1395 nt2.89□□□□□ -1.95
TDA11P38854 BPT1YLL015W 4680 nt2.89□□□□□ -1.95
TDA11P38854 XRN1YGL173C 4587 nt2.89□□□□□ -1.95
TDA11P38854 YGR064WYGR064W 369 nt2.89□□□□□ -1.95
TDA11P38854 YJR071WYJR071W 369 nt2.89□□□□□ -1.95
TDA11P38854 HOT13YKL084W 351 nt2.89□□□□□ -1.95
TDA11P38854 YBL028CYBL028C 321 nt2.89□□□□□ -1.95
TDA11P38854 YMR316C-AYMR316C-A 312 nt2.89□□□□□ -1.95
TDA11P38854 YBR116CYBR116C 528 nt2.89□□□□□ -1.95
TDA11P38854 YNR066CYNR066C 1311 nt2.89□□□□□ -1.95
TDA11P38854 SMC2YFR031C 3513 nt2.89□□□□□ -1.95
TDA11P38854 YAT2YER024W 2772 nt2.89□□□□□ -1.95
TDA11P38854 PFF1YBR074W 2931 nt2.88□□□□□ -1.95
TDA11P38854 IMP3YHR148W 552 nt2.88□□□□□ -1.95
TDA11P38854 SDP1YIL113W 630 nt2.88□□□□□ -1.95
TDA11P38854 YIL161WYIL161W 708 nt2.88□□□□□ -1.95
TDA11P38854 RPS22AYJL190C 393 nt2.88□□□□□ -1.95
TDA11P38854 TDA8YAL064C-A 381 nt2.88□□□□□ -1.95
TDA11P38854 YLR012CYLR012C 300 nt2.88□□□□□ -1.95
TDA11P38854 ERG2YMR202W 669 nt2.88□□□□□ -1.95
TDA11P38854 YNR062CYNR062C 984 nt2.88□□□□□ -1.95
TDA11P38854 TFC1YBR123C 1950 nt2.88□□□□□ -1.95
TDA11P38854 MTL1YGR023W 1656 nt2.88□□□□□ -1.95
TDA11P38854 HRD1YOL013C 1656 nt2.88□□□□□ -1.95
TDA11P38854 VAS1YGR094W 3315 nt2.88□□□□□ -1.95
TDA11P38854 NOP4YPL043W 2058 nt2.88□□□□□ -1.95
TDA11P38854 YDR336WYDR336W 945 nt2.87□□□□□ -1.95
TDA11P38854 PAN5YHR063C 1140 nt2.87□□□□□ -1.95
TDA11P38854 SOL3YHR163W 750 nt2.87□□□□□ -1.95
TDA11P38854 YJL175WYJL175W 513 nt2.87□□□□□ -1.95
TDA11P38854 YKL156C-AYKL156C-A 117 nt2.87□□□□□ -1.95
TDA11P38854 COA4YLR218C 453 nt2.87□□□□□ -1.95
TDA11P38854 YNL171CYNL171C 369 nt2.87□□□□□ -1.95
TDA11P38854 LCB4YOR171C 1875 nt2.87□□□□□ -1.95
TDA11P38854 NDC80YIL144W 2076 nt2.87□□□□□ -1.95
TDA11P38854 RRI1YDL216C 1323 nt2.87□□□□□ -1.95
TDA11P38854 EPL1YFL024C 2499 nt2.86□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms