Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC2P18074 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.86■■□□□ 1.09
ERCC2P18074 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
ERCC2P18074 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.86■■□□□ 1.09
ERCC2P18074 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC2P18074 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
ERCC2P18074 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC2P18074 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC2P18074 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC2P18074 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC2P18074 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.85■■□□□ 1.09
ERCC2P18074 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC2P18074 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC2P18074 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.85■■□□□ 1.09
ERCC2P18074 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.85■■□□□ 1.09
ERCC2P18074 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.85■■□□□ 1.09
ERCC2P18074 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.85■■□□□ 1.09
ERCC2P18074 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC2P18074 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
ERCC2P18074 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC2P18074 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC2P18074 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
ERCC2P18074 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC2P18074 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.84■■□□□ 1.09
ERCC2P18074 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ERCC2P18074 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ERCC2P18074 Z98882.1-201ENST00000622160 2253 ntBASIC21.84■■□□□ 1.09
ERCC2P18074 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ERCC2P18074 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ERCC2P18074 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ERCC2P18074 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.84■■□□□ 1.09
ERCC2P18074 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.84■■□□□ 1.09
ERCC2P18074 TERF1P2-201ENST00000583350 1212 ntBASIC21.84■■□□□ 1.09
ERCC2P18074 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.84■■□□□ 1.09
ERCC2P18074 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.84■■□□□ 1.09
ERCC2P18074 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ERCC2P18074 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ERCC2P18074 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ERCC2P18074 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ERCC2P18074 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
ERCC2P18074 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.83■■□□□ 1.09
ERCC2P18074 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.83■■□□□ 1.09
ERCC2P18074 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
ERCC2P18074 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ERCC2P18074 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.83■■□□□ 1.09
ERCC2P18074 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.83■■□□□ 1.09
ERCC2P18074 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ERCC2P18074 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ERCC2P18074 AC007375.3-201ENST00000600936 2314 ntBASIC21.83■■□□□ 1.08
ERCC2P18074 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
ERCC2P18074 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC2P18074 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.82■■□□□ 1.08
ERCC2P18074 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC2P18074 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC2P18074 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
ERCC2P18074 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC2P18074 AC079140.4-201ENST00000507448 529 ntBASIC21.82■■□□□ 1.08
ERCC2P18074 CCDC92B-201ENST00000575506 885 ntBASIC21.82■■□□□ 1.08
ERCC2P18074 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC2P18074 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC2P18074 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC2P18074 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.81■■□□□ 1.08
ERCC2P18074 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.81■■□□□ 1.08
ERCC2P18074 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.81■■□□□ 1.08
ERCC2P18074 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.81■■□□□ 1.08
ERCC2P18074 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.81■■□□□ 1.08
ERCC2P18074 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.81■■□□□ 1.08
ERCC2P18074 AC026310.3-201ENST00000625186 2373 ntBASIC21.81■■□□□ 1.08
ERCC2P18074 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
ERCC2P18074 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC2P18074 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ERCC2P18074 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC2P18074 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC2P18074 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC2P18074 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC2P18074 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.8■■□□□ 1.08
ERCC2P18074 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.8■■□□□ 1.08
ERCC2P18074 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC2P18074 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC2P18074 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ERCC2P18074 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC2P18074 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC2P18074 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms