Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.21■□□□□ 0.99
SP9P0CG40 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.21■□□□□ 0.99
SP9P0CG40 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SP9P0CG40 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.2■□□□□ 0.98
SP9P0CG40 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SP9P0CG40 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SP9P0CG40 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.2■□□□□ 0.98
SP9P0CG40 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SP9P0CG40 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SP9P0CG40 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.2■□□□□ 0.98
SP9P0CG40 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.2■□□□□ 0.98
SP9P0CG40 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SP9P0CG40 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.2■□□□□ 0.98
SP9P0CG40 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SP9P0CG40 KRT17P1-201ENST00000399211 1546 ntBASIC21.19■□□□□ 0.98
SP9P0CG40 AP006587.3-201ENST00000525742 1516 ntBASIC21.19■□□□□ 0.98
SP9P0CG40 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SP9P0CG40 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SP9P0CG40 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SP9P0CG40 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SP9P0CG40 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SP9P0CG40 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SP9P0CG40 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.19■□□□□ 0.98
SP9P0CG40 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SP9P0CG40 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SP9P0CG40 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SP9P0CG40 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.19■□□□□ 0.98
SP9P0CG40 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.19■□□□□ 0.98
SP9P0CG40 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.19■□□□□ 0.98
SP9P0CG40 OR7E47P-201ENST00000546390 1422 ntBASIC21.19■□□□□ 0.98
SP9P0CG40 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
SP9P0CG40 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SP9P0CG40 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SP9P0CG40 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.18■□□□□ 0.98
SP9P0CG40 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SP9P0CG40 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SP9P0CG40 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SP9P0CG40 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SP9P0CG40 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SP9P0CG40 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.18■□□□□ 0.98
SP9P0CG40 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SP9P0CG40 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SP9P0CG40 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.18■□□□□ 0.98
SP9P0CG40 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.18■□□□□ 0.98
SP9P0CG40 AC243732.1-201ENST00000612648 864 ntBASIC21.18■□□□□ 0.98
SP9P0CG40 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SP9P0CG40 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SP9P0CG40 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SP9P0CG40 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SP9P0CG40 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SP9P0CG40 AL139125.2-201ENST00000623134 1869 ntBASIC21.18■□□□□ 0.98
SP9P0CG40 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SP9P0CG40 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SP9P0CG40 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SP9P0CG40 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.17■□□□□ 0.98
SP9P0CG40 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SP9P0CG40 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.17■□□□□ 0.98
SP9P0CG40 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SP9P0CG40 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.17■□□□□ 0.98
SP9P0CG40 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SP9P0CG40 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SP9P0CG40 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SP9P0CG40 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.17■□□□□ 0.98
SP9P0CG40 AC142381.3-201ENST00000568208 1670 ntBASIC21.17■□□□□ 0.98
SP9P0CG40 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SP9P0CG40 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SP9P0CG40 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SP9P0CG40 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SP9P0CG40 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SP9P0CG40 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.16■□□□□ 0.98
SP9P0CG40 KRT16P2-201ENST00000414673 1423 ntBASIC21.16■□□□□ 0.98
SP9P0CG40 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SP9P0CG40 AL355472.2-201ENST00000422958 438 ntBASIC21.16■□□□□ 0.98
SP9P0CG40 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.16■□□□□ 0.98
SP9P0CG40 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.16■□□□□ 0.98
SP9P0CG40 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
SP9P0CG40 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.16■□□□□ 0.98
SP9P0CG40 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.16■□□□□ 0.98
SP9P0CG40 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.16■□□□□ 0.98
SP9P0CG40 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SP9P0CG40 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SP9P0CG40 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SP9P0CG40 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.15■□□□□ 0.98
SP9P0CG40 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.15■□□□□ 0.98
SP9P0CG40 PNMA6B-201ENST00000538162 1200 ntBASIC21.15■□□□□ 0.98
SP9P0CG40 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.15■□□□□ 0.98
SP9P0CG40 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.15■□□□□ 0.98
SP9P0CG40 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SP9P0CG40 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.15■□□□□ 0.98
SP9P0CG40 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SP9P0CG40 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.14■□□□□ 0.98
SP9P0CG40 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SP9P0CG40 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
SP9P0CG40 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SP9P0CG40 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.14■□□□□ 0.97
SP9P0CG40 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.14■□□□□ 0.97
SP9P0CG40 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SP9P0CG40 AC233263.1-201ENST00000578059 224 ntBASIC21.14■□□□□ 0.97
SP9P0CG40 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SP9P0CG40 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms