Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.19■□□□□ 0.82
CTSBP07858 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSBP07858 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTSBP07858 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSBP07858 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSBP07858 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.19■□□□□ 0.82
CTSBP07858 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSBP07858 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTSBP07858 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CTSBP07858 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSBP07858 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSBP07858 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSBP07858 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSBP07858 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CTSBP07858 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSBP07858 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSBP07858 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.18■□□□□ 0.82
CTSBP07858 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CTSBP07858 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.18■□□□□ 0.82
CTSBP07858 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.18■□□□□ 0.82
CTSBP07858 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CTSBP07858 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.18■□□□□ 0.82
CTSBP07858 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.18■□□□□ 0.82
CTSBP07858 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTSBP07858 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTSBP07858 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.18■□□□□ 0.82
CTSBP07858 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSBP07858 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CTSBP07858 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSBP07858 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.17■□□□□ 0.82
CTSBP07858 ECEL1P1-201ENST00000373592 1742 ntBASIC20.17■□□□□ 0.82
CTSBP07858 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSBP07858 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSBP07858 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTSBP07858 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSBP07858 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.17■□□□□ 0.82
CTSBP07858 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.17■□□□□ 0.82
CTSBP07858 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.17■□□□□ 0.82
CTSBP07858 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.17■□□□□ 0.82
CTSBP07858 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.17■□□□□ 0.82
CTSBP07858 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.17■□□□□ 0.82
CTSBP07858 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.17■□□□□ 0.82
CTSBP07858 MYCNOS-205ENST00000641950 531 ntBASIC20.17■□□□□ 0.82
CTSBP07858 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CTSBP07858 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTSBP07858 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.17■□□□□ 0.82
CTSBP07858 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSBP07858 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTSBP07858 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSBP07858 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.16■□□□□ 0.82
CTSBP07858 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.16■□□□□ 0.82
CTSBP07858 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSBP07858 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSBP07858 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSBP07858 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSBP07858 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSBP07858 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.16■□□□□ 0.82
CTSBP07858 CROCCP5-201ENST00000436658 830 ntBASIC20.16■□□□□ 0.82
CTSBP07858 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSBP07858 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.16■□□□□ 0.82
CTSBP07858 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.16■□□□□ 0.82
CTSBP07858 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSBP07858 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CTSBP07858 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSBP07858 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSBP07858 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTSBP07858 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTSBP07858 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTSBP07858 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTSBP07858 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTSBP07858 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTSBP07858 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CTSBP07858 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTSBP07858 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CTSBP07858 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTSBP07858 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.15■□□□□ 0.82
CTSBP07858 DUX4L16-201ENST00000555130 1264 ntBASIC20.15■□□□□ 0.82
CTSBP07858 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTSBP07858 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CTSBP07858 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTSBP07858 AC061975.6-201ENST00000579045 1553 ntBASIC20.15■□□□□ 0.82
CTSBP07858 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.15■□□□□ 0.82
CTSBP07858 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTSBP07858 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.14■□□□□ 0.81
CTSBP07858 AL117328.2-201ENST00000624617 1940 ntBASIC20.14■□□□□ 0.81
CTSBP07858 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTSBP07858 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CTSBP07858 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTSBP07858 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTSBP07858 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTSBP07858 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTSBP07858 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.14■□□□□ 0.81
CTSBP07858 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.14■□□□□ 0.81
CTSBP07858 KRT18P11-201ENST00000435214 1283 ntBASIC20.14■□□□□ 0.81
CTSBP07858 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.14■□□□□ 0.81
CTSBP07858 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.14■□□□□ 0.81
CTSBP07858 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTSBP07858 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CTSBP07858 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTSBP07858 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms