Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN1P07384 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CAPN1P07384 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CAPN1P07384 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
CAPN1P07384 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN1P07384 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN1P07384 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN1P07384 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN1P07384 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN1P07384 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
CAPN1P07384 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.82■□□□□ 0.92
CAPN1P07384 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPN1P07384 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.82■□□□□ 0.92
CAPN1P07384 DUX4L2-201ENST00000561772 1275 ntBASIC20.82■□□□□ 0.92
CAPN1P07384 AL354811.1-201ENST00000610286 706 ntBASIC20.82■□□□□ 0.92
CAPN1P07384 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
CAPN1P07384 DUX4L6-201ENST00000626483 1275 ntBASIC20.82■□□□□ 0.92
CAPN1P07384 DUX4L1-201ENST00000627662 1275 ntBASIC20.82■□□□□ 0.92
CAPN1P07384 DUX4L8-201ENST00000629013 1275 ntBASIC20.82■□□□□ 0.92
CAPN1P07384 DUX4L3-201ENST00000630187 1275 ntBASIC20.82■□□□□ 0.92
CAPN1P07384 DUX4L7-201ENST00000630678 1275 ntBASIC20.82■□□□□ 0.92
CAPN1P07384 DUX4L5-201ENST00000630834 1275 ntBASIC20.82■□□□□ 0.92
CAPN1P07384 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
CAPN1P07384 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN1P07384 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN1P07384 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN1P07384 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPN1P07384 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN1P07384 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPN1P07384 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.81■□□□□ 0.92
CAPN1P07384 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CAPN1P07384 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN1P07384 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN1P07384 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.81■□□□□ 0.92
CAPN1P07384 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN1P07384 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN1P07384 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN1P07384 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN1P07384 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN1P07384 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN1P07384 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN1P07384 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.8■□□□□ 0.92
CAPN1P07384 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN1P07384 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.8■□□□□ 0.92
CAPN1P07384 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
CAPN1P07384 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CAPN1P07384 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.8■□□□□ 0.92
CAPN1P07384 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.8■□□□□ 0.92
CAPN1P07384 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.8■□□□□ 0.92
CAPN1P07384 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
CAPN1P07384 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN1P07384 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN1P07384 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.79■□□□□ 0.92
CAPN1P07384 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN1P07384 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CAPN1P07384 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN1P07384 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN1P07384 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
CAPN1P07384 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.79■□□□□ 0.92
CAPN1P07384 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.79■□□□□ 0.92
CAPN1P07384 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.79■□□□□ 0.92
CAPN1P07384 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN1P07384 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.79■□□□□ 0.92
CAPN1P07384 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
CAPN1P07384 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.79■□□□□ 0.92
CAPN1P07384 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN1P07384 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CAPN1P07384 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.79■□□□□ 0.92
CAPN1P07384 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPN1P07384 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPN1P07384 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.79■□□□□ 0.92
CAPN1P07384 OXCT2P1-201ENST00000447263 1535 ntBASIC20.78■□□□□ 0.92
CAPN1P07384 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN1P07384 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN1P07384 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN1P07384 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN1P07384 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN1P07384 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN1P07384 KRT18P5-201ENST00000436075 1291 ntBASIC20.78■□□□□ 0.92
CAPN1P07384 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CAPN1P07384 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CAPN1P07384 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.78■□□□□ 0.92
CAPN1P07384 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN1P07384 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN1P07384 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CAPN1P07384 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN1P07384 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.77■□□□□ 0.92
CAPN1P07384 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.77■□□□□ 0.92
CAPN1P07384 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.77■□□□□ 0.92
CAPN1P07384 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.77■□□□□ 0.92
CAPN1P07384 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN1P07384 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CAPN1P07384 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPN1P07384 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CAPN1P07384 Z98882.1-201ENST00000622160 2253 ntBASIC20.76■□□□□ 0.91
CAPN1P07384 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.76■□□□□ 0.91
CAPN1P07384 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.76■□□□□ 0.91
CAPN1P07384 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN1P07384 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CAPN1P07384 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms