Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HMGN1P05114 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGN1P05114 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.16■□□□□ 0.66
HMGN1P05114 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGN1P05114 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGN1P05114 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGN1P05114 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGN1P05114 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGN1P05114 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HMGN1P05114 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGN1P05114 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGN1P05114 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGN1P05114 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGN1P05114 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGN1P05114 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGN1P05114 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGN1P05114 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HMGN1P05114 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HMGN1P05114 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
HMGN1P05114 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HMGN1P05114 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
HMGN1P05114 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.14■□□□□ 0.66
HMGN1P05114 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGN1P05114 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HMGN1P05114 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGN1P05114 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGN1P05114 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGN1P05114 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGN1P05114 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGN1P05114 SRD5A1P1-201ENST00000442297 786 ntBASIC19.14■□□□□ 0.65
HMGN1P05114 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGN1P05114 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGN1P05114 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGN1P05114 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.13■□□□□ 0.65
HMGN1P05114 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGN1P05114 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGN1P05114 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGN1P05114 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.13■□□□□ 0.65
HMGN1P05114 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.13■□□□□ 0.65
HMGN1P05114 MIR3621-201ENST00000580529 85 ntBASIC19.13■□□□□ 0.65
HMGN1P05114 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.13■□□□□ 0.65
HMGN1P05114 AP004607.7-201ENST00000527152 1677 ntBASIC19.13■□□□□ 0.65
HMGN1P05114 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
HMGN1P05114 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGN1P05114 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGN1P05114 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGN1P05114 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGN1P05114 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGN1P05114 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGN1P05114 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGN1P05114 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGN1P05114 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGN1P05114 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGN1P05114 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGN1P05114 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.12■□□□□ 0.65
HMGN1P05114 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGN1P05114 AC003102.1-202ENST00000563394 1796 ntBASIC19.12■□□□□ 0.65
HMGN1P05114 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
HMGN1P05114 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
HMGN1P05114 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
HMGN1P05114 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGN1P05114 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HMGN1P05114 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGN1P05114 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGN1P05114 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 AL157384.1-201ENST00000445995 2473 ntBASIC19.11■□□□□ 0.65
HMGN1P05114 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HMGN1P05114 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HMGN1P05114 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.11■□□□□ 0.65
HMGN1P05114 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.11■□□□□ 0.65
HMGN1P05114 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGN1P05114 AC010525.1-201ENST00000585559 441 ntBASIC19.11■□□□□ 0.65
HMGN1P05114 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.11■□□□□ 0.65
HMGN1P05114 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.11■□□□□ 0.65
HMGN1P05114 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGN1P05114 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms