Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRAP04437 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TCRAP04437 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TCRAP04437 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TCRAP04437 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.11■□□□□ 0.17
TCRAP04437 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.11■□□□□ 0.17
TCRAP04437 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRAP04437 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.11■□□□□ 0.17
TCRAP04437 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TCRAP04437 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRAP04437 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 KRT125P-201ENST00000546827 989 ntBASIC16.11■□□□□ 0.17
TCRAP04437 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRAP04437 AL451085.2-201ENST00000605085 799 ntBASIC16.11■□□□□ 0.17
TCRAP04437 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRAP04437 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
TCRAP04437 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRAP04437 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRAP04437 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TCRAP04437 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
TCRAP04437 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.1■□□□□ 0.17
TCRAP04437 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TCRAP04437 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.1■□□□□ 0.17
TCRAP04437 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.1■□□□□ 0.17
TCRAP04437 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRAP04437 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TCRAP04437 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRAP04437 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRAP04437 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.1■□□□□ 0.17
TCRAP04437 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.1■□□□□ 0.17
TCRAP04437 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TCRAP04437 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TCRAP04437 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.09■□□□□ 0.17
TCRAP04437 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.09■□□□□ 0.17
TCRAP04437 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TCRAP04437 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.09■□□□□ 0.17
TCRAP04437 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.09■□□□□ 0.17
TCRAP04437 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCRAP04437 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCRAP04437 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TCRAP04437 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCRAP04437 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TCRAP04437 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
TCRAP04437 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCRAP04437 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCRAP04437 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.08■□□□□ 0.16
TCRAP04437 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.08■□□□□ 0.16
TCRAP04437 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.08■□□□□ 0.16
TCRAP04437 Z92544.1-202ENST00000571933 1220 ntBASIC16.08■□□□□ 0.16
TCRAP04437 AC010997.5-201ENST00000609182 354 ntBASIC16.08■□□□□ 0.16
TCRAP04437 AC087239.1-201ENST00000622671 572 ntBASIC16.08■□□□□ 0.16
TCRAP04437 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.08■□□□□ 0.16
TCRAP04437 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TCRAP04437 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TCRAP04437 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRAP04437 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.08■□□□□ 0.16
TCRAP04437 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms