Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND1P03886 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.93■□□□□ 0.78
MT-ND1P03886 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.93■□□□□ 0.78
MT-ND1P03886 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND1P03886 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
MT-ND1P03886 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
MT-ND1P03886 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MT-ND1P03886 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 KRT16P3-201ENST00000439127 1283 ntBASIC19.92■□□□□ 0.78
MT-ND1P03886 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.92■□□□□ 0.78
MT-ND1P03886 AC079089.2-201ENST00000531211 1277 ntBASIC19.92■□□□□ 0.78
MT-ND1P03886 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.92■□□□□ 0.78
MT-ND1P03886 AL035685.1-201ENST00000636663 812 ntBASIC19.92■□□□□ 0.78
MT-ND1P03886 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.92■□□□□ 0.78
MT-ND1P03886 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
MT-ND1P03886 RNF165-205ENST00000588679 2904 ntBASIC19.92■□□□□ 0.78
MT-ND1P03886 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND1P03886 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND1P03886 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND1P03886 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND1P03886 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND1P03886 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND1P03886 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND1P03886 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.91■□□□□ 0.78
MT-ND1P03886 AL499627.2-201ENST00000606283 725 ntBASIC19.91■□□□□ 0.78
MT-ND1P03886 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND1P03886 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
MT-ND1P03886 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MT-ND1P03886 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND1P03886 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND1P03886 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MT-ND1P03886 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND1P03886 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.91■□□□□ 0.78
MT-ND1P03886 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.91■□□□□ 0.78
MT-ND1P03886 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-ND1P03886 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
MT-ND1P03886 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.9■□□□□ 0.78
MT-ND1P03886 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND1P03886 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND1P03886 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND1P03886 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
MT-ND1P03886 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.9■□□□□ 0.78
MT-ND1P03886 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.9■□□□□ 0.78
MT-ND1P03886 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.9■□□□□ 0.78
MT-ND1P03886 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.9■□□□□ 0.78
MT-ND1P03886 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.9■□□□□ 0.78
MT-ND1P03886 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND1P03886 OR7E47P-201ENST00000546390 1422 ntBASIC19.9■□□□□ 0.78
MT-ND1P03886 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND1P03886 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.9■□□□□ 0.78
MT-ND1P03886 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND1P03886 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
MT-ND1P03886 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND1P03886 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
MT-ND1P03886 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND1P03886 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.89■□□□□ 0.78
MT-ND1P03886 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MT-ND1P03886 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
MT-ND1P03886 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
MT-ND1P03886 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MT-ND1P03886 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
MT-ND1P03886 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND1P03886 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND1P03886 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
MT-ND1P03886 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND1P03886 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
MT-ND1P03886 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND1P03886 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND1P03886 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.89■□□□□ 0.77
MT-ND1P03886 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.89■□□□□ 0.77
MT-ND1P03886 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.89■□□□□ 0.77
MT-ND1P03886 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.89■□□□□ 0.77
MT-ND1P03886 AC241377.3-202ENST00000626088 1088 ntBASIC19.89■□□□□ 0.77
MT-ND1P03886 AC241585.3-202ENST00000628937 1088 ntBASIC19.89■□□□□ 0.77
MT-ND1P03886 AC245100.8-202ENST00000629247 1058 ntBASIC19.89■□□□□ 0.77
MT-ND1P03886 AL031602.1-201ENST00000633169 911 ntBASIC19.89■□□□□ 0.77
MT-ND1P03886 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
MT-ND1P03886 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND1P03886 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND1P03886 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND1P03886 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MT-ND1P03886 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.88■□□□□ 0.77
MT-ND1P03886 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
MT-ND1P03886 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MT-ND1P03886 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND1P03886 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND1P03886 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.88■□□□□ 0.77
MT-ND1P03886 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms