Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 AC018755.3-202ENST00000596210 929 ntBASIC15.92■□□□□ 0.14
HLA-DQA1P01909 U85056.1-201ENST00000616429 682 ntBASIC15.92■□□□□ 0.14
HLA-DQA1P01909 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQA1P01909 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 AC104564.3-201ENST00000582367 638 ntBASIC15.91■□□□□ 0.14
HLA-DQA1P01909 CA15P2-201ENST00000611168 834 ntBASIC15.91■□□□□ 0.14
HLA-DQA1P01909 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQA1P01909 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQA1P01909 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA1P01909 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA1P01909 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DQA1P01909 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA1P01909 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA1P01909 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.89■□□□□ 0.13
HLA-DQA1P01909 NTF6A-201ENST00000591175 560 ntBASIC15.89■□□□□ 0.13
HLA-DQA1P01909 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DQA1P01909 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA1P01909 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA1P01909 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQA1P01909 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HLA-DQA1P01909 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA1P01909 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQA1P01909 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DQA1P01909 BX323043.1-201ENST00000641006 1765 ntBASIC15.87■□□□□ 0.13
HLA-DQA1P01909 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.87■□□□□ 0.13
HLA-DQA1P01909 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQA1P01909 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms