Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV12-3P01733 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV12-3P01733 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV12-3P01733 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV12-3P01733 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV12-3P01733 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRBV12-3P01733 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV12-3P01733 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.41■□□□□ 0.22
TRBV12-3P01733 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.41■□□□□ 0.22
TRBV12-3P01733 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRBV12-3P01733 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV12-3P01733 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.41■□□□□ 0.22
TRBV12-3P01733 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV12-3P01733 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
TRBV12-3P01733 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV12-3P01733 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV12-3P01733 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV12-3P01733 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV12-3P01733 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV12-3P01733 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
TRBV12-3P01733 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV12-3P01733 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV12-3P01733 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV12-3P01733 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV12-3P01733 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV12-3P01733 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV12-3P01733 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV12-3P01733 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV12-3P01733 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV12-3P01733 AC034268.1-201ENST00000441047 882 ntBASIC16.4■□□□□ 0.22
TRBV12-3P01733 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.4■□□□□ 0.22
TRBV12-3P01733 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV12-3P01733 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV12-3P01733 KRT18P61-201ENST00000585825 1298 ntBASIC16.4■□□□□ 0.22
TRBV12-3P01733 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV12-3P01733 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.4■□□□□ 0.22
TRBV12-3P01733 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV12-3P01733 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV12-3P01733 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV12-3P01733 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV12-3P01733 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV12-3P01733 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV12-3P01733 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV12-3P01733 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV12-3P01733 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRBV12-3P01733 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.4■□□□□ 0.22
TRBV12-3P01733 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRBV12-3P01733 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV12-3P01733 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV12-3P01733 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 AC004854.2-201ENST00000608450 1441 ntBASIC16.39■□□□□ 0.21
TRBV12-3P01733 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV12-3P01733 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRBV12-3P01733 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.39■□□□□ 0.21
TRBV12-3P01733 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.39■□□□□ 0.21
TRBV12-3P01733 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV12-3P01733 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV12-3P01733 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV12-3P01733 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV12-3P01733 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV12-3P01733 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV12-3P01733 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV12-3P01733 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 KRT87P-202ENST00000534226 1464 ntBASIC16.38■□□□□ 0.21
TRBV12-3P01733 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV12-3P01733 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV12-3P01733 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 MIR5787-201ENST00000611784 55 ntBASIC16.38■□□□□ 0.21
TRBV12-3P01733 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV12-3P01733 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV12-3P01733 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV12-3P01733 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV12-3P01733 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV12-3P01733 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV12-3P01733 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms