Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
MBD4O95243 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
MBD4O95243 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.4■■□□□ 1.66
MBD4O95243 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
MBD4O95243 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.4■■□□□ 1.66
MBD4O95243 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
MBD4O95243 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
MBD4O95243 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
MBD4O95243 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.4■■□□□ 1.66
MBD4O95243 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.4■■□□□ 1.66
MBD4O95243 AC080038.1-201ENST00000611274 1154 ntBASIC25.4■■□□□ 1.66
MBD4O95243 BID-214ENST00000617586 542 ntTSL 5 BASIC25.4■■□□□ 1.66
MBD4O95243 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
MBD4O95243 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
MBD4O95243 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
MBD4O95243 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.39■■□□□ 1.66
MBD4O95243 KRT18P11-201ENST00000435214 1283 ntBASIC25.39■■□□□ 1.66
MBD4O95243 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.39■■□□□ 1.66
MBD4O95243 AC090192.1-201ENST00000517740 490 ntBASIC25.39■■□□□ 1.66
MBD4O95243 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.39■■□□□ 1.66
MBD4O95243 AC011767.1-201ENST00000617410 1153 ntBASIC25.39■■□□□ 1.66
MBD4O95243 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.39■■□□□ 1.65
MBD4O95243 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
MBD4O95243 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
MBD4O95243 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.39■■□□□ 1.65
MBD4O95243 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
MBD4O95243 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MBD4O95243 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
MBD4O95243 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.38■■□□□ 1.65
MBD4O95243 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.38■■□□□ 1.65
MBD4O95243 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MBD4O95243 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
MBD4O95243 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MBD4O95243 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
MBD4O95243 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.38■■□□□ 1.65
MBD4O95243 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.38■■□□□ 1.65
MBD4O95243 MFSD11-216ENST00000590393 1141 ntBASIC25.38■■□□□ 1.65
MBD4O95243 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MBD4O95243 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
MBD4O95243 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.38■■□□□ 1.65
MBD4O95243 EP400NL-214ENST00000641289 2402 ntBASIC25.38■■□□□ 1.65
MBD4O95243 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.38■■□□□ 1.65
MBD4O95243 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.38■■□□□ 1.65
MBD4O95243 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MBD4O95243 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
MBD4O95243 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.37■■□□□ 1.65
MBD4O95243 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MBD4O95243 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.37■■□□□ 1.65
MBD4O95243 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
MBD4O95243 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
MBD4O95243 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.37■■□□□ 1.65
MBD4O95243 MYCNOS-205ENST00000641950 531 ntBASIC25.37■■□□□ 1.65
MBD4O95243 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
MBD4O95243 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MBD4O95243 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MBD4O95243 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
MBD4O95243 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
MBD4O95243 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
MBD4O95243 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
MBD4O95243 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
MBD4O95243 C11orf96-202ENST00000528572 1834 ntBASIC25.36■■□□□ 1.65
MBD4O95243 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.36■■□□□ 1.65
MBD4O95243 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
MBD4O95243 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.36■■□□□ 1.65
MBD4O95243 SLC7A5P2-201ENST00000553010 536 ntBASIC25.36■■□□□ 1.65
MBD4O95243 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.36■■□□□ 1.65
MBD4O95243 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.36■■□□□ 1.65
MBD4O95243 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.36■■□□□ 1.65
MBD4O95243 AC073111.5-205ENST00000641717 521 ntBASIC25.36■■□□□ 1.65
MBD4O95243 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.36■■□□□ 1.65
MBD4O95243 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
MBD4O95243 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
MBD4O95243 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
MBD4O95243 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.35■■□□□ 1.65
MBD4O95243 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
MBD4O95243 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
MBD4O95243 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
MBD4O95243 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.35■■□□□ 1.65
MBD4O95243 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.35■■□□□ 1.65
MBD4O95243 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
MBD4O95243 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
MBD4O95243 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
MBD4O95243 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.35■■□□□ 1.65
MBD4O95243 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
MBD4O95243 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
MBD4O95243 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
MBD4O95243 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
MBD4O95243 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
MBD4O95243 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
MBD4O95243 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
MBD4O95243 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
MBD4O95243 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
MBD4O95243 CDCA4P2-201ENST00000441182 718 ntBASIC25.34■■□□□ 1.65
MBD4O95243 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.34■■□□□ 1.65
MBD4O95243 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
MBD4O95243 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
MBD4O95243 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
MBD4O95243 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
MBD4O95243 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.33■■□□□ 1.65
MBD4O95243 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms