Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D4O60343 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D4O60343 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.52■■□□□ 1.2
TBC1D4O60343 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D4O60343 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D4O60343 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D4O60343 AL355802.2-201ENST00000402069 882 ntBASIC22.52■■□□□ 1.2
TBC1D4O60343 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D4O60343 TERF1P5-201ENST00000477545 1207 ntBASIC22.52■■□□□ 1.2
TBC1D4O60343 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D4O60343 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.52■■□□□ 1.2
TBC1D4O60343 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.52■■□□□ 1.2
TBC1D4O60343 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TBC1D4O60343 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.52■■□□□ 1.2
TBC1D4O60343 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TBC1D4O60343 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.52■■□□□ 1.2
TBC1D4O60343 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TBC1D4O60343 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TBC1D4O60343 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TBC1D4O60343 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
TBC1D4O60343 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TBC1D4O60343 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.51■■□□□ 1.19
TBC1D4O60343 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TBC1D4O60343 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TBC1D4O60343 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.5■■□□□ 1.19
TBC1D4O60343 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.5■■□□□ 1.19
TBC1D4O60343 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.5■■□□□ 1.19
TBC1D4O60343 AC092053.2-201ENST00000640557 1818 ntBASIC22.5■■□□□ 1.19
TBC1D4O60343 C1orf229-201ENST00000623686 2258 ntBASIC22.5■■□□□ 1.19
TBC1D4O60343 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.5■■□□□ 1.19
TBC1D4O60343 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TBC1D4O60343 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.5■■□□□ 1.19
TBC1D4O60343 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.5■■□□□ 1.19
TBC1D4O60343 AC133552.2-202ENST00000575694 574 ntBASIC22.5■■□□□ 1.19
TBC1D4O60343 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TBC1D4O60343 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TBC1D4O60343 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TBC1D4O60343 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TBC1D4O60343 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.5■■□□□ 1.19
TBC1D4O60343 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TBC1D4O60343 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D4O60343 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D4O60343 AC080038.3-201ENST00000623346 1952 ntBASIC22.49■■□□□ 1.19
TBC1D4O60343 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
TBC1D4O60343 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D4O60343 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.49■■□□□ 1.19
TBC1D4O60343 AC007322.4-201ENST00000509611 723 ntBASIC22.49■■□□□ 1.19
TBC1D4O60343 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.49■■□□□ 1.19
TBC1D4O60343 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.49■■□□□ 1.19
TBC1D4O60343 AC013268.1-206ENST00000638368 961 ntBASIC22.49■■□□□ 1.19
TBC1D4O60343 AC112229.1-201ENST00000639295 961 ntBASIC22.49■■□□□ 1.19
TBC1D4O60343 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D4O60343 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.49■■□□□ 1.19
TBC1D4O60343 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D4O60343 AC003102.1-202ENST00000563394 1796 ntBASIC22.48■■□□□ 1.19
TBC1D4O60343 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TBC1D4O60343 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TBC1D4O60343 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.48■■□□□ 1.19
TBC1D4O60343 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
TBC1D4O60343 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TBC1D4O60343 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
TBC1D4O60343 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
TBC1D4O60343 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
TBC1D4O60343 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TBC1D4O60343 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TBC1D4O60343 AC068338.2-201ENST00000563278 1430 ntBASIC22.48■■□□□ 1.19
TBC1D4O60343 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
TBC1D4O60343 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D4O60343 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D4O60343 POU5F1P4-201ENST00000413175 1085 ntBASIC22.47■■□□□ 1.19
TBC1D4O60343 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
TBC1D4O60343 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.47■■□□□ 1.19
TBC1D4O60343 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
TBC1D4O60343 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D4O60343 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D4O60343 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D4O60343 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D4O60343 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
TBC1D4O60343 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
TBC1D4O60343 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D4O60343 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D4O60343 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.46■■□□□ 1.19
TBC1D4O60343 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
TBC1D4O60343 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.46■■□□□ 1.19
TBC1D4O60343 AC008175.2-201ENST00000612840 297 ntBASIC22.46■■□□□ 1.19
TBC1D4O60343 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.46■■□□□ 1.19
TBC1D4O60343 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D4O60343 C9orf163-202ENST00000624034 2573 ntBASIC22.46■■□□□ 1.19
TBC1D4O60343 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D4O60343 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
TBC1D4O60343 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D4O60343 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D4O60343 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.46■■□□□ 1.19
TBC1D4O60343 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TBC1D4O60343 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
TBC1D4O60343 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
TBC1D4O60343 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
TBC1D4O60343 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TBC1D4O60343 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.45■■□□□ 1.18
TBC1D4O60343 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms