Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LCMT2O60294 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LCMT2O60294 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LCMT2O60294 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LCMT2O60294 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.33■□□□□ 0.85
LCMT2O60294 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LCMT2O60294 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LCMT2O60294 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LCMT2O60294 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.33■□□□□ 0.85
LCMT2O60294 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LCMT2O60294 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.33■□□□□ 0.85
LCMT2O60294 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.33■□□□□ 0.85
LCMT2O60294 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LCMT2O60294 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LCMT2O60294 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LCMT2O60294 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LCMT2O60294 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LCMT2O60294 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCMT2O60294 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LCMT2O60294 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LCMT2O60294 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCMT2O60294 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.32■□□□□ 0.84
LCMT2O60294 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LCMT2O60294 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LCMT2O60294 AC034268.1-201ENST00000441047 882 ntBASIC20.32■□□□□ 0.84
LCMT2O60294 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.32■□□□□ 0.84
LCMT2O60294 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.32■□□□□ 0.84
LCMT2O60294 AC104564.3-201ENST00000582367 638 ntBASIC20.32■□□□□ 0.84
LCMT2O60294 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.32■□□□□ 0.84
LCMT2O60294 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LCMT2O60294 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCMT2O60294 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.32■□□□□ 0.84
LCMT2O60294 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCMT2O60294 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.32■□□□□ 0.84
LCMT2O60294 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCMT2O60294 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.32■□□□□ 0.84
LCMT2O60294 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LCMT2O60294 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.31■□□□□ 0.84
LCMT2O60294 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.31■□□□□ 0.84
LCMT2O60294 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LCMT2O60294 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.31■□□□□ 0.84
LCMT2O60294 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LCMT2O60294 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.31■□□□□ 0.84
LCMT2O60294 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LCMT2O60294 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.31■□□□□ 0.84
LCMT2O60294 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCMT2O60294 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCMT2O60294 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LCMT2O60294 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCMT2O60294 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCMT2O60294 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.3■□□□□ 0.84
LCMT2O60294 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LCMT2O60294 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
LCMT2O60294 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.3■□□□□ 0.84
LCMT2O60294 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.3■□□□□ 0.84
LCMT2O60294 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.3■□□□□ 0.84
LCMT2O60294 KRT18P61-201ENST00000585825 1298 ntBASIC20.3■□□□□ 0.84
LCMT2O60294 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.3■□□□□ 0.84
LCMT2O60294 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LCMT2O60294 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCMT2O60294 AP004607.4-201ENST00000530158 1459 ntBASIC20.3■□□□□ 0.84
LCMT2O60294 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCMT2O60294 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LCMT2O60294 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCMT2O60294 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCMT2O60294 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCMT2O60294 AC244015.2-201ENST00000616358 1861 ntBASIC20.29■□□□□ 0.84
LCMT2O60294 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCMT2O60294 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.29■□□□□ 0.84
LCMT2O60294 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.29■□□□□ 0.84
LCMT2O60294 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.29■□□□□ 0.84
LCMT2O60294 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LCMT2O60294 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.29■□□□□ 0.84
LCMT2O60294 KRT87P-202ENST00000534226 1464 ntBASIC20.29■□□□□ 0.84
LCMT2O60294 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.28■□□□□ 0.84
LCMT2O60294 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.28■□□□□ 0.84
LCMT2O60294 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
LCMT2O60294 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.28■□□□□ 0.84
LCMT2O60294 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCMT2O60294 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LCMT2O60294 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.28■□□□□ 0.84
LCMT2O60294 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.28■□□□□ 0.84
LCMT2O60294 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.28■□□□□ 0.84
LCMT2O60294 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LCMT2O60294 EEF1DP3-203ENST00000566025 782 ntBASIC20.28■□□□□ 0.84
LCMT2O60294 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.28■□□□□ 0.84
LCMT2O60294 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms