Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RNF13O43567 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF13O43567 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF13O43567 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF13O43567 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF13O43567 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RNF13O43567 AL034346.1-201ENST00000568244 1277 ntBASIC19.26■□□□□ 0.67
RNF13O43567 AC106739.1-201ENST00000617035 715 ntBASIC19.26■□□□□ 0.67
RNF13O43567 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.26■□□□□ 0.67
RNF13O43567 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF13O43567 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF13O43567 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF13O43567 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RNF13O43567 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF13O43567 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF13O43567 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF13O43567 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RNF13O43567 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF13O43567 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF13O43567 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF13O43567 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF13O43567 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF13O43567 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF13O43567 AP004607.7-201ENST00000527152 1677 ntBASIC19.25■□□□□ 0.67
RNF13O43567 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF13O43567 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF13O43567 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.25■□□□□ 0.67
RNF13O43567 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF13O43567 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.25■□□□□ 0.67
RNF13O43567 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF13O43567 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF13O43567 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF13O43567 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF13O43567 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF13O43567 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF13O43567 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF13O43567 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
RNF13O43567 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF13O43567 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF13O43567 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF13O43567 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
RNF13O43567 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF13O43567 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.24■□□□□ 0.67
RNF13O43567 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF13O43567 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF13O43567 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF13O43567 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF13O43567 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF13O43567 AC026471.6-201ENST00000622954 1905 ntBASIC19.23■□□□□ 0.67
RNF13O43567 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF13O43567 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF13O43567 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF13O43567 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF13O43567 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF13O43567 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF13O43567 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF13O43567 AC099791.1-201ENST00000416440 715 ntBASIC19.23■□□□□ 0.67
RNF13O43567 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF13O43567 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
RNF13O43567 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF13O43567 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF13O43567 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RNF13O43567 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF13O43567 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RNF13O43567 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF13O43567 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF13O43567 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF13O43567 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF13O43567 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF13O43567 EDA-201ENST00000338901 1233 ntBASIC19.22■□□□□ 0.67
RNF13O43567 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF13O43567 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF13O43567 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RNF13O43567 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.22■□□□□ 0.67
RNF13O43567 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF13O43567 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF13O43567 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RNF13O43567 AC027682.1-201ENST00000562846 899 ntBASIC19.22■□□□□ 0.67
RNF13O43567 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF13O43567 AC110285.6-201ENST00000617652 491 ntBASIC19.22■□□□□ 0.67
RNF13O43567 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF13O43567 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RNF13O43567 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF13O43567 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 IGHV3-19-201ENST00000521488 291 ntBASIC19.21■□□□□ 0.67
RNF13O43567 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 AC104564.3-201ENST00000582367 638 ntBASIC19.21■□□□□ 0.67
RNF13O43567 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF13O43567 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RNF13O43567 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms