Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPK1AO00322 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPK1AO00322 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UPK1AO00322 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.12■□□□□ 0.81
UPK1AO00322 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.12■□□□□ 0.81
UPK1AO00322 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1AO00322 AC092667.1-201ENST00000434301 2586 ntBASIC20.12■□□□□ 0.81
UPK1AO00322 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1AO00322 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.12■□□□□ 0.81
UPK1AO00322 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1AO00322 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
UPK1AO00322 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1AO00322 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1AO00322 MIR939-201ENST00000401314 82 ntBASIC20.12■□□□□ 0.81
UPK1AO00322 AF213884.3-201ENST00000563833 479 ntBASIC20.12■□□□□ 0.81
UPK1AO00322 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1AO00322 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1AO00322 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
UPK1AO00322 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1AO00322 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.12■□□□□ 0.81
UPK1AO00322 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1AO00322 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
UPK1AO00322 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.11■□□□□ 0.81
UPK1AO00322 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1AO00322 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
UPK1AO00322 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1AO00322 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.11■□□□□ 0.81
UPK1AO00322 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1AO00322 AL136967.2-201ENST00000623968 743 ntBASIC20.11■□□□□ 0.81
UPK1AO00322 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1AO00322 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1AO00322 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1AO00322 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK1AO00322 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPK1AO00322 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPK1AO00322 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPK1AO00322 RASA4CP-201ENST00000424092 1398 ntBASIC20.1■□□□□ 0.81
UPK1AO00322 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPK1AO00322 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.1■□□□□ 0.81
UPK1AO00322 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.1■□□□□ 0.81
UPK1AO00322 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPK1AO00322 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
UPK1AO00322 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPK1AO00322 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.1■□□□□ 0.81
UPK1AO00322 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.1■□□□□ 0.81
UPK1AO00322 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
UPK1AO00322 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.1■□□□□ 0.81
UPK1AO00322 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1AO00322 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1AO00322 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1AO00322 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.09■□□□□ 0.81
UPK1AO00322 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
UPK1AO00322 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1AO00322 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.09■□□□□ 0.81
UPK1AO00322 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
UPK1AO00322 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1AO00322 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1AO00322 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.09■□□□□ 0.81
UPK1AO00322 AC091305.1-201ENST00000479476 895 ntBASIC20.09■□□□□ 0.81
UPK1AO00322 SUDS3P1-201ENST00000505831 966 ntBASIC20.09■□□□□ 0.81
UPK1AO00322 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.09■□□□□ 0.81
UPK1AO00322 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.09■□□□□ 0.81
UPK1AO00322 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1AO00322 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1AO00322 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1AO00322 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.09■□□□□ 0.81
UPK1AO00322 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.09■□□□□ 0.81
UPK1AO00322 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1AO00322 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.09■□□□□ 0.81
UPK1AO00322 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.09■□□□□ 0.81
UPK1AO00322 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPK1AO00322 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UPK1AO00322 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.08■□□□□ 0.81
UPK1AO00322 AC026471.6-201ENST00000622954 1905 ntBASIC20.08■□□□□ 0.81
UPK1AO00322 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UPK1AO00322 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPK1AO00322 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.08■□□□□ 0.81
UPK1AO00322 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.08■□□□□ 0.81
UPK1AO00322 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.08■□□□□ 0.81
UPK1AO00322 SMUG1P1-201ENST00000590640 811 ntBASIC20.08■□□□□ 0.81
UPK1AO00322 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
UPK1AO00322 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UPK1AO00322 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UPK1AO00322 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPK1AO00322 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UPK1AO00322 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPK1AO00322 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.08■□□□□ 0.8
UPK1AO00322 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UPK1AO00322 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPK1AO00322 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPK1AO00322 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.07■□□□□ 0.8
UPK1AO00322 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPK1AO00322 TSPY26P-201ENST00000476365 1326 ntBASIC20.07■□□□□ 0.8
UPK1AO00322 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UPK1AO00322 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
UPK1AO00322 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPK1AO00322 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.07■□□□□ 0.8
UPK1AO00322 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UPK1AO00322 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.07■□□□□ 0.8
UPK1AO00322 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms